KEGG   Pelosinus fermentans: JBW_01943Help
Entry
JBW_01943         CDS       T03813                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pft  Pelosinus fermentans
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pft00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    JBW_01943
Enzymes [BR:pft01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     JBW_01943
DNA repair and recombination proteins [BR:pft03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     JBW_01943
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2248101..2249102)
Genome map
AA seq 333 aa AA seqDB search
MQLIKPMLAKPAKLPLDDAQYSFEIKWDGIRAMLYYNAEQLTIRSRNLNDITHQYPELQQ
LKKKLTRQKIILDGEIITFDKKGLPSFPILQQRMGLSSLTVIHRKMLETPVTYIIFDILY
FNQSLLELSYTKRRSLLESLQLSDANWQTPAYQQGSGKEILAATSALNLEGIIAKRLNST
YIPGARSEDWLKIKNQYRQELVIGGWLPGQGQRSGGIGSLLLGYYDRTLQEAKKENKPQH
FLYAGKVGTGFTKNMLHKLYTLLIPLHRNTSPFTTNEFPNTTVFVEPRLVGEFEFTEWTP
NNTLRHPSFKGLRNDKAAHDVVQETKNTNSITI
NT seq 1002 nt NT seq  +upstreamnt  +downstreamnt
atgcaattaattaaacctatgttagccaaaccagctaaattgccacttgatgatgcccaa
tacagttttgagatcaagtgggatggaatccgtgcaatgctttactataatgcagaacaa
ttaaccataagaagccgcaatttaaatgatattacacatcaatatccagaacttcaacaa
ttgaaaaagaaattaactcggcaaaaaattatacttgatggagaaattattacatttgat
aagaaaggtctaccttcctttcctatcttacaacaacgtatgggtcttagttcccttacc
gttatccataggaaaatgctagaaacacctgtaacctacattatcttcgatattctctac
tttaaccaatccctattagagctttcctatacaaaacgccgatcccttttagaaagcttg
cagctttcagatgccaattggcagactccagcttatcaacaaggcagcggtaaagaaata
ctagccgcaacctctgccttaaacctagaaggtattattgccaaacgcttaaacagcacc
tatattcctggagcacgcagtgaagattggcttaaaataaaaaatcagtaccgtcaggaa
ttagtaattggtggctggctgcctgggcaaggtcaacgttctggaggaatcggttccctg
ctattaggctattatgataggactctccaggaagctaaaaaagaaaataaaccgcaacac
tttctttatgccggaaaagtgggtacaggctttacaaaaaatatgcttcataaactttat
accctgcttattcctctgcatcgcaatactagcccttttaccacaaatgaatttcccaat
acgaccgtattcgtagagcctcgtttagtcggcgaatttgaattcacagaatggacaccg
aataacacccttcgtcatccgtcatttaaaggtctacgaaatgacaaagctgcccatgat
gtagtacaagaaacaaagaacacgaactctataacaatttaa

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