Pseudomonas lurida: A7318_14875
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Entry
A7318_14875 CDS
T04730
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfx
Pseudomonas lurida
Pathway
pfx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A7318_14875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfx03021
]
A7318_14875
Transcription machinery [BR:
pfx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7318_14875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_28
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
AOE79831
UniProt:
A0A5E7TVH6
LinkDB
All DBs
Position
complement(3354808..3355320)
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AA seq
170 aa
AA seq
DB search
MSTSFTHLYGTHHSWLLGLLRRRLSDRWDAADLAHDTFIRILSRPLAETDPVRQRSYLAT
IARGLCIDHWRRRQLERAWLQTLAERPQALQPSPEQRAIIVETLVEVDTMLARLPKKVSE
AFLLAQLHGLPYKQIAEQLGVGERMVKKYMAQALLHCAILEAELDGLLVQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacctcttttactcacctctacggcactcatcacagttggctgctcggcctgcta
cgccggcgcttgagcgatcgttgggatgccgccgacctggcccacgacacgtttatccgc
attctcagccgcccgctggccgagactgaccccgtccgccagcgctcctacctggccacc
atcgctcgcgggctgtgcattgaccattggcgccggcgccagctcgaacgcgcctggctg
caaaccctggccgagcggcctcaagcgctgcaaccgtcgccggagcaacgggcgatcatc
gtcgagacgctagtggaagtggataccatgctcgcgcgcctgccgaaaaaagtcagcgaa
gcgttcctgctcgcccagttgcatggcctgccctacaagcagatcgccgagcagcttggc
gtgggtgagcgcatggtcaagaagtacatggcccaggccctgttgcattgcgcgatcctg
gaagccgaactcgacgggctgctggtgcaatga
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