Pseudomonas fragi: AV641_07670
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Entry
AV641_07670 CDS
T04285
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfz03009
]
AV641_07670
03016 Transfer RNA biogenesis [BR:
pfz03016
]
AV641_07670
Enzymes [BR:
pfz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
AV641_07670
5.4.99.29 23S rRNA pseudouridine746 synthase
AV641_07670
Ribosome biogenesis [BR:
pfz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AV641_07670
Transfer RNA biogenesis [BR:
pfz03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
AV641_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMB78952
LinkDB
All DBs
Position
complement(1634845..1635480)
Genome browser
AA seq
211 aa
AA seq
DB search
MPLSNIHIIHQDAGVLVVNKPTLLLSVPGRAEDNKDCLITRLQENGYPEARIVHRLDWET
SGIILLARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHVV
DHEFGKNALTFWKVLERCGDYCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHPQALA
AWPRLCLHASMLSFTHPQTGERLRFECPAPF
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtcgaacatccacattatccatcaggacgctggcgttctggtcgtcaacaag
ccgaccctgctgctttccgtgccaggccgggctgaagacaacaaagactgtctgatcacc
cgcctgcaagagaacggctatcccgaggcgcgcatcgtccatcgcctggactgggaaacc
tcggggatcattttgctggcccgtgatgccgatacccatcgcgagttgtcgcgacagttt
cacgaccgcgaaaccgaaaaagcctacaccgcgctggcctggggtcagcccgaactggac
agcggcagcattgacttgccattgcgttacgacccgccgaccaaaccccggcatgtggtc
gaccacgagttcggcaaaaacgccctgactttctggaaagtgctggagcgatgcggcgac
tactgccgggttgaactgacgccgatcaccggtcgctcgcaccagttgcgcgtgcatatg
ctgtctatcggccacccgttgttgggcgacggactgtacgcccacccccaggcgctggca
gcctggccgcgcctgtgtctgcacgccagcatgcttagcttcacccacccgcaaacgggc
gagcgcctgcgctttgagtgcccggcacctttctga
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