Pseudomonas fragi: AV641_16730
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Entry
AV641_16730 CDS
T04285
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfz03021
]
AV641_16730
Transcription machinery [BR:
pfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AV641_16730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
PNMA
Motif
Other DBs
NCBI-ProteinID:
AMB80591
LinkDB
All DBs
Position
complement(3732459..3733025)
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AA seq
188 aa
AA seq
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MRYDPRELSDEELVARAHDELFHVTRAYEELMRRYQRTLFNVCSRYLGNDRDADDVCQEV
MLKVLYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSIDPLEEASEEKAP
KPEEKGGLDRWLVHVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLRE
KFAGIAET
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacgacccccgcgagctctctgatgaggagttggtggcgcgcgcgcatgatgag
ttgtttcacgtcacgcgcgcctatgaagaactgatgcgacgctatcagcgcaccttgttc
aacgtttgttcaagatatttagggaacgatagggacgctgatgatgtctgtcaggaagtg
atgctaaaggtgctgtatggtctgaagaatttcgagggcaaatcgaaattcaaaacatgg
ctatatagtattacttacaacgaatgtattacgcagtatcgaaaggaacggcgaaagcgt
cgcttgatggacgcattaagtattgaccccctcgaggaagcgtccgaagaaaaggcgccg
aaacctgaggaaaagggcggacttgatcgctggctggtgcatgtgaacccgatagatcgt
gaaattttagtgctgcgttttgtcgcagaactggaatttcaggaaatcgcagacataatg
catatgggtttgagtgcgacaaagatgcgttacaagcgtgctcttgataaattacgtgag
aaatttgcaggtattgctgaaacttag
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