Phaeobacter gallaeciensis DSM 26640: Gal_02546
Help
Entry
Gal_02546 CDS
T02968
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03420
Nucleotide excision repair
pgd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gal_02546
03430 Mismatch repair
Gal_02546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgd03400
]
Gal_02546
Enzymes [BR:
pgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gal_02546
DNA repair and recombination proteins [BR:
pgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gal_02546
MMR (mismatch excision repair)
Other MMR factors
Gal_02546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHD10291
UniProt:
V9WGX8
LinkDB
All DBs
Position
complement(2565748..2568159)
Genome browser
AA seq
803 aa
AA seq
DB search
MNALFSPGLKRANVAPMSSFDDIDPYEGISLSARAMAARPMPYLDGLNPAQRAAVECLEG
PVLMLAGAGTGKTKALTARIVHLLTTGTAKPNEILAVTFTNKAAREMKERVAGMLGQAVE
GMPWLGTFHSICVKLLRRHAELVGLKSNFTILDTDDQIRLLKQLIKAEGIDDKRWPARML
AGVIDDWKNRALTPSKVPVSDASAYNHRGVDFYAQYQARLKDLNAVDFGDLLLHMVTIFQ
DNPDVLEQYQRWFRFIMVDEYQDTNVAQYLWLRLLAGAHKNICCVGDDDQSIYGWRGAEV
GNILRFEKDFPGANVVRLEQNYRSTEHILSAASGVIRGNSGRLGKELWTEARGGEKVRLI
GHWDGEEEARWIGEEIEAMQRGTRGLAPVDLNNMAILVRASHQMRAFEDRFLTIGLPYRV
IGGPRFYERLEIRDAMAYFRLVVSVDDDLAFERIVNTPKRGLGDKAQQTIQTMARSNGVS
LVEGARLAVESGQIKGKGGNALRQLVTDLARWGRLAGDADMTHMELAETILDESGYTSMW
QTDKNPDSPGRLENLKELVKALEAFENLQGFLEHVSLIMDNDKQDAAQKVSIMTLHAAKG
LEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEEICTISFAGNRRVFG
QWQSQLPSRFIDELPEEHVEVLTPPGLYGGGYGAAAPGGGGGAVRSTIEDRMAAADGYNS
PGWKRMQSRAGERGLSQPKESKSSVIDLTATSAFMVGERVFHQKFGYGAISGIEGDKLEV
DFEKAGTKKVVARFVTAAEDVPF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccctcttttcgccgggattgaaacgcgctaatgtcgcgcccatgagcagtttt
gacgatatcgacccctatgaggggatctcgctgtccgcgcgcgccatggctgcgcggccg
atgccctatctcgacgggttgaacccggcacagcgggccgcagttgaatgcctggagggg
cctgtgctgatgctggcaggggccggcaccggcaagacgaaggcgctgactgcgcgcatc
gtgcatcttctgaccacgggcaccgccaaaccgaacgagatcctcgccgtgacctttacc
aataaggccgcacgcgagatgaaagagcgggttgcaggcatgttggggcaggcggttgag
gggatgccctggcttggcactttccactccatctgcgtgaaactgctgcgccgccatgcg
gaactggtcggcctcaaatccaatttcaccattctggatactgatgatcagatccgcctg
ctgaaacagctgatcaaggctgaaggcattgatgacaaacgctggcctgcgcgcatgctg
gcaggcgtcattgacgattggaaaaaccgggcgctgacgccgtctaaggtgccggtctcc
gatgccagcgcctacaaccatcgcggcgtggatttctacgcccagtatcaggcgcggcta
aaggatctgaacgcggtcgattttggcgacctgctgctgcatatggtcaccatctttcag
gataacccggatgtactggagcagtaccaacgctggttccgcttcatcatggtggacgaa
tatcaggataccaatgtggcgcagtatctctggctgcggttgctggcgggcgcgcataag
aacatctgctgcgtcggtgacgatgatcagtcgatctatggctggcgcggcgcggaggtc
ggcaatatcctgcggtttgaaaaggatttccccggcgccaatgtggtgcgtctggaacag
aactaccgctcgaccgaacatattctcagcgccgcctccggtgtgatccgtggcaattcc
ggtcgtctgggcaaggaactgtggaccgaggcgcgcggtggcgagaaggtgcgcctgatc
ggtcattgggatggcgaggaagaggcccgctggatcggcgaggagatcgaggcgatgcag
cgcggtacccgtggtctggcgccggttgacctcaacaatatggcgattctggtccgggcc
tcccatcagatgcgcgcctttgaggatcggttcctgacgattggcctgccgtaccgggtc
attggtggtccgcgcttttatgagcgactcgaaattcgcgatgccatggcctatttccgg
ctggtggtcagtgttgacgatgacctggcttttgagcggatcgttaacacgccgaagcgc
ggccttggcgacaaggcgcagcagaccattcagaccatggcgcgcagcaatggcgtctcc
ctggtagaaggcgcgcggcttgcggtcgaatccggccagatcaagggcaagggtggcaat
gcgctgcgccagctggtcactgaccttgcccgctgggggcgtctggcgggcgacgccgat
atgacccatatggagctggccgaaaccattctggatgaaagcggctacaccagcatgtgg
cagaccgacaaaaacccggattcgccggggcgtctggaaaacctcaaggaactggtgaaa
gcgctggaggcgtttgaaaacctgcaaggcttcctcgaacatgtcagtctgatcatggat
aatgacaaacaggacgccgcccaaaaggtgtcgatcatgacgctgcacgccgccaaaggg
ttggaatttccggccgtgttcctgccggggtgggaggatggcctgttcccgtcgcagcgc
tccatggacgaaagcggcctgaagggcctcgaggaggagcgccgtctggcctatgtcggc
atcacacgggccgaggaaatctgcaccatctcctttgccggcaaccgccgtgtcttcggg
caatggcaatcacagctgccgtcgcggtttatcgatgagctgccggaagaacatgtcgag
gtgctgaccccgcccggtctttatggtggcggctacggggctgcggcccccggcggcggc
ggtggggcggtgcgctccacgatcgaggatcgcatggcggccgccgacgggtataactca
cccggctggaagcgcatgcagtcccgcgccggtgagcgtggtctgtcacagcccaaggaa
agtaaatccagcgtcattgatctcaccgcgacatccgccttcatggtcggggagcgggtg
tttcatcagaaatttggctatggcgcgatcagcggcatagagggggacaagctggaggtt
gatttcgagaaggctggcaccaagaaagtcgtggcccgctttgtcaccgcagcagaggat
gtccccttttaa
DBGET
integrated database retrieval system
