Phaeobacter inhibens 2.10: PGA2_c24190
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Entry
PGA2_c24190 CDS
T02193
Symbol
uvrB
Name
(GenBank) uvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGA2_c24190 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_c24190 (uvrB)
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGA2_c24190 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PGA2_c24190 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
UB2H
AAA_19
AAA
DUF87
AAA_25
eIF3_p135
AAA_7
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AFO88401
UniProt:
A0AA86D8H1
LinkDB
All DBs
Position
2668237..2670435
Genome browser
AA seq
732 aa
AA seq
DB search
MPYAHSDKSMPMMADRAPQHRPKLEGGREFVMHTEFDPAGDQPTAIKELSEGVLEGERNQ
VLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDY
YQPEAYVARSDTYIEKESQINEQIDRMRHSATRSLLERDDVIIIASVSCIYGIGSVETYS
AMTQDLKVGDDYDQRQVMADLVAQQYKRNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLS
FFGEELEGITEFDPLTGEKTGTFDQIRVYANSHYVTPKPTLKQAVISIKEELKMRLDQLV
GEGKLLEAQRLEQRTNFDIEMLEATGHCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIV
FADESHVSVPQIGGMYKGDHRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSAT
PSKWELEQSSGVFAEQVIRPTGLLDPQVEIRPVDMQVDDLLDEVRRVTADGFRTLVTTLT
KRMAEDLTEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPEC
GLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALGETNRRREKQ
IAYNEEHGITPATVKKNVEDVLAGLYAGDVDMNRVTATIDKPMHGANLEAHLAGLREQMR
KAAENLEFEEAARLRDEVKRLEAVDLAVSDDPLARQSAIEAASDAAVKSRGRSTAGKAGT
RAYRGKSQKKFS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgcccattccgacaaatccatgccgatgatggctgaccgcgcgccgcagcac
cgccccaagctggaaggcggacgggaatttgtgatgcatacggaattcgatcctgcaggc
gaccagcccaccgccatcaaggaactctccgaaggggtgctggagggcgagcgcaatcag
gtgctgctgggtgccaccggaacgggcaagacattcaccatggccaaggtgatcgaagag
acccagcgcccggccatcattctggcgccgaacaagacgctggcggcgcaattatatgga
gaattcaaaggcttcttccctgagaactcggtcgaatacttcgtctcattctacgactat
taccagccggaggcctatgtcgcgcgctccgatacctatatcgagaaggaaagccagatc
aacgaacagatcgaccggatgcgccactccgccacccggtcgctgctggaacgggatgat
gtgatcatcatcgcgtcggtctcctgtatctatggtatcggctcggtcgagacctattca
gcgatgacgcaggacctgaaggtcggcgacgactatgaccagcggcaggtgatggccgat
ctggttgcccagcagtacaaacgcaacgatcaggcgtttcagcgcggcagtttccgggtg
cgcggcgattcgctggagattttccccgcccaccttgaggatcgcgcctggcggctgtcc
ttctttggtgaggagctggagggcatcaccgagttcgacccgctcactggcgagaaaacc
ggcacattcgatcagatccgggtctatgcgaattcccactatgtgacgccgaaaccgacg
ctgaaacaggcggtcatctcgatcaaggaagagctgaagatgcggctcgaccaattggtt
ggtgagggcaagctgctggaagcgcagcgactggaacagcgcaccaattttgacatcgaa
atgctggaggccaccggtcattgcaacgggatcgagaactactcgcgctatctgaccggc
cgcgcaccgggcgagccgccgccgaccctgtttgagttcatccctgacaatgccattgtt
tttgcagatgaatcccatgtctccgtgccgcagatcggcggcatgtacaagggcgaccat
cggcgcaaattcacgcttgcggagcatggcttccgcctgccctcctgcatggacaaccgc
cctctgaagttcgaggaatgggacgccatgcgcccgcagtcggtgtttgtctccgccacg
ccatccaaatgggagctggaacaatccagcggcgtctttgccgaacaggtgatccgcccc
accggccttctggatccgcaggtcgaaatccgcccggttgatatgcaggttgacgatctg
ctggatgaggtgcgccgcgtcaccgcagatgggttccgcacgctggtgacaaccctcacc
aaacgtatggccgaggatctgaccgaatatatgcacgaacaggggatcaaggtccgctac
atgcacagcgacattgatacgctggagcggatcgagatcctgcgcgatctgcgtcttggg
gcctttgacgtgctgatcggcatcaacctgttgcgcgaaggtctggatatccccgaatgc
gggttggtcgccattctggatgccgacaaggaggggttcctgcgctcggagacctcgctg
attcagaccattggccgtgccgcccggaatgccgaaggccgggtcatcatgtatgccgac
cggatcactggttcgatggagcgcgcgttgggggaaaccaaccgccgccgcgagaaacag
atcgcctataacgaggaacacggcatcacccccgcaaccgtcaagaaaaacgtcgaggat
gttctggccggtctttacgcgggcgatgtggatatgaaccgcgtgaccgccaccatcgac
aaaccgatgcatggcgccaatctggaagcccatctggccgggctgcgcgagcagatgcgc
aaggccgccgagaacctggagttcgaggaagccgcgcgtctgcgcgacgaggtcaagcgg
ctggaagcggtggatcttgcggtctccgacgatccactggcgcgacaatccgcgatcgag
gccgcatccgatgcggcggtcaaatcacgggggcggtccaccgcaggcaaggccgggaca
cgggcctatcggggcaaatcgcagaagaaattctcatag
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