Puccinia graminis: PGTG_01084
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Entry
PGTG_01084 CDS
T02226
Name
(RefSeq) DNA-directed RNA polymerase III subunit C1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pgr
Puccinia graminis
Pathway
pgr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PGTG_01084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_01084
Enzymes [BR:
pgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PGTG_01084
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PGTG_01084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
10543745
NCBI-ProteinID:
XP_003320172
UniProt:
E3JUM8
LinkDB
All DBs
AA seq
1419 aa
AA seq
DB search
MKQIVLQEAPQKIKHIQFSVLSSQEIVALSEYESTQRDLYSMVGSENNGISIPGAIEPLV
KKPAKGGVLDSRLGTSDKSGICGTCNAKMADCVGHYSYIKLILPVFHIGYFRAVIQMLQD
ICKTCARVLLSEEDRRLYLIKFRRPNLENLQRQHLAKQVNTACRKIITCPYCGATNGTVK
KVGALRIIHEKFRAKKKADELAAFRDTFITAVKETKELGPHLHKAQEDMNPLRVLNLFRR
ITPSDCELLGLDPEVGRPEEYIWQYIHVPPVCIRPSVAQEAATNEDDLTVKLTEIIFTNT
LIKTGLVKGVPTQNIMEQWEFMQLSVAMYINAELPGVPSQMGVKPIKGFCQRLKGKTGRF
RGNLSGKRVDFSGRTVISPDPNLSITEVAVPDRVAKILTYPERVTAHNIDRLRQCIRNGP
DIHPGANYLVAGSTTNASGSALPFKRSLKFGNRNHVANTLRLGDTVERHLHDGDVVLFNR
QPSLHKLSIMSHRAKIRPWRTFRFNECVCTPYNADFDGDEMNLHVPQTEEARTEATELMN
IKYNLVTPRNGEPIIAATQDFITASFLLSRKDNFYDRQQFSQILQYLSDATLHIDLPPPV
IWKPVRLWTGKQVFNVLMRPNKDSPVKVNVEAKCATHQKAAPEYLPDMSPNDGWLVIQNS
EIMCGVVDKAIVGGGKKDSIFAVINCDFGPDEAVKAMNRLAKVSARWLANMGFSIGVGDV
TPGERLSTQKNALVAKAYKETDELIQQSKAGKLETLPGRDLDQTLEAMISGVLSKVRDSL
GEICMAELTRHNAPLIMATCGSKGSKINVAQMVACVGQQIISGNRIPDGFQDRSLPHFHK
KAKEPPAKGFVRNSFHSGLRATEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLA
TRYDDSVRNSVGGVVQFTYGDDGLDPTYLEGDGEPVEFARTWRHTKATVSHLDGRGLHPY
EITQLVTDGLAQPRFTTACTQRFRDSVLDFMVERVVKPAANFRQSYGMYPALELEGDWDE
YTDLSAGVSEASKKIVINKTQVTLKQIETFLDHCWKKYVKAKVEPGTAVGAVGAQSIGEP
GTQMTLKTFHFAGVASMNITLGVPRIKEIINASKLINGPIINAPLVANHNERSARIVKAR
LEKTYLGDVTSVIEEMYSNDSMYLGIHIDMETVQRLQLEVTLDSIKWSIINAPKLKITAD
QIQIIPRKNRIRVYVDTNLADGEKVLPFYQKLMFLRRVLPGVVIKGLPKAGRTVINKNSK
NEYELLVEGYGLLDVMTTDGVVGTHTMPNHIMEAQSVLGIEAARNCIIKEISYTMDSHGL
KVDPRHMMLLGDIMCYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAALYSKRDAI
EGVSECIIMGNPANDIGTSAACLVSEVPKLPPRRKVLFY
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatcgtattgcaggaagcgccccagaagataaaacatatccaattctccgtt
ttatcttctcaagagatcgtggcattatccgaatatgaatccactcaacgtgatctctat
agcatggttggatcggagaacaatggaatcagtattccaggtgcaatcgaacccctcgtc
aagaaacccgccaaaggtggcgtcttggatagcagattgggaacgtccgacaaatccgga
atatgcggaacttgtaacgcgaaaatggcagactgcgtcggccactactcctacatcaaa
ctcatcctcccggtattccatatcggttactttcgggcggtgatccagatgctccaagat
atttgcaagacgtgtgctagggtgctcttatcagaagaagatcggcggctgtatctcatc
aagtttcgacgtcccaatcttgagaacctacagcgacagcacctagccaagcaagtcaac
actgcctgccgcaagattatcacttgtccttattgcggtgctaccaacggtaccgtcaag
aaagtcggtgctttacgaatcattcatgagaaattcagagcaaagaagaaagcagatgaa
ctagcggcgttcagagatacctttatcaccgccgtcaaagaaactaaagaattaggacca
caccttcacaaggctcaggaagatatgaacccactccgagtactgaatctctttcgaagg
ataaccccttcagattgtgaattgcttggtttggaccctgaagttggacggcctgaagaa
tacatttggcagtacattcatgtcccaccggtctgtatcaggcccagtgttgcacaagag
gccgccacaaacgaagatgatctgacagtcaaactaacagaaattatctttaccaatacc
ctgatcaaaaccggactagtcaagggggttccaacacaaaacattatggagcaatgggaa
ttcatgcagctctcggttgccatgtacatcaatgctgaacttcctggagtcccttcccaa
atgggggtcaaaccaatcaaaggcttctgccaaagactgaaaggaaaaactggtcgattt
cgtggcaatctatccggtaaacgtgtcgacttttctggtcgaacggtcatcagtcccgat
ccgaatcttagcatcacagaggtggcggttccggatcgggtggcaaaaatcctgacgtat
cctgaacgggttactgctcataacattgatcggctacggcaatgtatccgaaatggacct
gatatccatccgggtgccaactatcttgtggcaggcagcacaacaaacgcaagcggaagc
gcgctccccttcaaaagatctttaaaattcgggaatcggaatcatgtcgcgaacaccctt
cgattaggggacacagtggagaggcatttacatgatggagatgttgtactcttcaatcgg
cagccgagtctgcacaaactgtcaatcatgtctcatcgagccaagatacgaccttggcga
acttttcgattcaacgagtgtgtttgcacaccctacaatgctgatttcgacggagatgaa
atgaatttgcatgtaccgcagactgaagaagcccggactgaagccacggagctgatgaat
atcaaatataaccttgttacccctcgaaatggcgaaccgatcattgctgccactcaagat
ttcattaccgcctcgtttctattatctagaaaagataacttttatgaccgacagcaattc
agccaaatcctccaatacttgtctgatgctaccttacacatagatctcccacctccggta
atttggaaacccgttcgactatggactggcaagcaagtctttaacgtcctcatgaggccg
aacaaagattctcctgtgaaagtcaatgttgaagccaaatgtgctacacatcaaaaagct
gcacccgaatatttgcccgacatgtcgcctaatgatggctggctcgtcattcaaaattca
gaaatcatgtgtggggtagtcgataaagctattgtgggtggaggaaaaaaggattcgatc
ttcgcagtcatcaattgtgactttggtcctgatgaagctgttaaggccatgaatagactt
gccaaagttagtgctcggtggctagcgaatatgggattttccatcggtgtcggcgatgtt
acgccgggtgaaagactatctacccagaaaaacgcactggttgccaaagcctataaagag
acggacgaacttattcagcaatcgaaagctggcaaactagaaaccctgccagggcgcgac
ttggatcaaacacttgaggctatgatttccggagttctctcaaaggtcagagacagtttg
ggtgagatttgtatggcggaactcacaaggcacaatgcacctttgatcatggcgacctgt
ggatccaaaggttccaagattaacgtggcccagatggtagcttgcgttgggcaacagatt
atcagcggtaatcgtatcccggatggttttcaagaccggtctcttccccacttccacaag
aaagccaaagagccaccagccaaaggtttcgtcagaaacagtttccattctggccttcgt
gcaaccgagtttctcttccatgcaatctctggtcgagaaggtctcgttgataccgcggtc
aagaccgccgagacaggttatatgcaaaggagattgatgaaagccttagaagatctggcc
actcgttacgatgactccgttagaaactctgtgggcggagtcgtccagtttacctatgga
gatgatggcttggatcctacttacttagagggagacggcgagcctgtggaatttgcccgt
acttggaggcacaccaaagccacagtttcgcaccttgatggacgagggcttcatccatac
gaaatcacccaattagtgaccgatggtctagctcagcctcgttttaccaccgcttgcacc
caacgtttcagagactcggtcttggatttcatggttgagcgggtcgtcaagcctgctgcg
aatttcagacagagctatggcatgtatcccgctctagaattagaaggagattgggacgaa
tacacagacctgtctgccggagtgagcgaggccagtaagaaaattgttatcaataagacg
caagtcaccctcaaacaaatagagacattcttggaccattgctggaaaaaatatgtcaaa
gctaaagtcgagccaggtactgccgtcggtgctgtcggtgctcaatcgattggtgaacct
ggaacccaaatgacgttgaagactttccattttgctggtgtagcctccatgaacattacg
cttggtgtacctcgaatcaaagagattataaatgcttccaaactgattaacggaccgatc
atcaacgcacctctagtggctaatcacaatgaaaggtccgccagaatcgtcaaggcccgg
ctggagaaaacctacttgggtgatgtcacatctgttatcgaagaaatgtattccaacgat
tcaatgtaccttggtattcacatcgacatggaaaccgttcaacgcttgcagctggaagtc
accttagattcaatcaaatggtcaatcatcaacgcgcctaaattgaaaattactgctgac
caaatacaaatcattcctcgcaagaatcgtatccgggtttatgtagataccaacttagca
gacggtgagaaagtactaccgttttatcaaaagttgatgttccttcgccgagtccttcca
ggcgtggtgatcaaaggccttcccaaagctggccggacagtcatcaacaaaaacagcaag
aatgaatatgaacttctcgtcgaagggtatggtctgcttgatgtaatgaccacagatggt
gttgttggcacacatactatgcccaatcatatcatggaagcacaaagtgtgctagggatc
gaagcggctcgaaactgtattattaaagaaatctcgtacacgatggactcgcacggattg
aaagtcgacccgcgacacatgatgttattaggagacatcatgtgctacaagggagaagtg
cttggaatcacccgatttgggattgccaaaatgaaagattcagtccttatgttggcttcg
ttcgagaaaacaaccgaccatcttttcgatgctgccttgtatagcaaaagagacgctatc
gaaggcgtgtcggaatgtatcatcatgggcaaccccgcaaatgatatcggcacatcagcg
gcttgtttggtctccgaagtacccaaacttccacccagacgaaaagtcctgttttattaa
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