KEGG   Pantholops hodgsonii (chiru): 102318719Help
Entry
102318719         CDS       T02909                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
phd  Pantholops hodgsonii (chiru)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:phd00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    102318719 (LIG4)
Enzymes [BR:phd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102318719 (LIG4)
DNA repair and recombination proteins [BR:phd03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     102318719 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQNDV
TDSFYPAMRLILPQLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLSIQQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSA
LEQKWLIRMIVKDLKLGFSQHTIFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGASPQEGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSEL
QTCYCVFDVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIIGGYWGKGARGGMM
SHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILC
GTEKPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLE
QLRGKACGKLASKHLYMSGDDEPQEKKRKAAPKIKKVIGIIEHLKAPNLSNVNRVSTVFE
DVEFCVMSGTSNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDV
VKPEWLLECFRTRSCVPWQPRFMIHMCPSTKQHFAQEYDQYGDSYFVDTDVHQLKEVFSG
IKNSGEQTPGEMSPVIADLEHRYSWASMPLSMFRHHTVYLDLYAVINDLSTRIKGARLAI
TALELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDE
CELQEENQYLV
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacaaacctcacagactgttgcatctcacgttccttttgcagatttatgt
tcgactttagaacgaatacagaaaagtaaagggcgtgcagaaaaaatcagacacttcaaa
gcatttttagattcttggagaaaatttcatgatgcccttcataagaaccaaaacgatgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagggagagaatg
gcctatggaatcaaagaaattatgctggctaagctttatgttgaattgcttaacttgcct
cgagatggaaaagatgcccttaagcttttgaactacagaacaccgaccggaacccgtgga
gatgctggagactttgcaatgattgcgtactttgtattgaaacccagatgtctacagaaa
ggaagcctaagcattcagcaagtaaatgacattttagactccattgccagcaataattct
gccaaaaggaaagacctaatgaagaaaagtgttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgttaaggacctaaagcttggctttagtcag
cacactatattttctgtttttcaccgtgatgctgccgagttgcataatgtcaccacagat
ctggagaaggtctgtaggcaactgcacgatccttcagtgggactcagtgacatttccatc
accttattctctgcctttaaacccatgctggccgctatagcagatattgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctcgacggcgagcggatgcag
atgcacaaggatggggatgtgtaccggtacttctctcgcaatgggtataactatgaggac
cagtttggtgcctccccacaggaagggtccctcacaccattcattcataatgcattcaga
acagatgtgctgaactgtatcctcgacggtgagatgatggcctacaaccctaacacacag
acttttatgcaaaaggggaataagtttgatattaaaagaatggtggaagattctgagctg
cagacttgttactgtgtttttgatgtattgatggttaatgataaaaagctaggacatgag
accctgagaaagaggtttgaaattcttaatagtgttttcacacctgtaccaggtagaata
gaaatagtgcagaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcgatagataaaagagaagaggggatcatggtgaaacacccgctgtccatttacaagcca
gataaaagaggtgaaggatggttaaaaattaaaccagagtatgtcagtggactgatggat
gagctggacatcttaatcatcgggggctactgggggaagggtgcccggggtgggatgatg
tctcattttttgtgcgccgtggcagagaagcccgcttctggtgaaaaaccctcagtgttt
cacactctctgtcgcgttggctcgggttacactatgaaagaactgtacgacctgggtttg
aagttggccaaacactggaagccttttcatagaaaagccccaccaagcaacattctatgt
ggaacagagaagccagaggtctacatcgagccttgcaattcagtcattgttcaggttaag
gccacagagatcgtccccagtgacatgtataaaactggctgcacgttgcgttttccacgg
attgagaaaataagagaagacaaagaatggtatgaatgtacatccctggaggacttagag
caacttcgagggaaggcctgtggaaagctcgcgtccaaacacctttacatgagtggcgat
gatgaaccacaagagaaaaagcggaaagctgcccccaagataaagaaagtcattggaatt
attgagcacctaaaagctcccaacctttctaacgtaaacagggtttctactgtctttgaa
gacgtggagttttgtgtcatgagtggaaccagcaaccatcccaagcctgacctggaaaac
agaatcgccgaattgggtggttacatagtacagaacccaggcccagacacgtactgtgtg
attgcagggtctgacaacattcgagtgaagaatatcatctcttcagataaacatgatgtc
gtcaagccagagtggctgctagagtgttttaggaccagaagctgtgtgccctggcaaccc
cgcttcatgatccacatgtgcccgtcaacaaagcaacactttgcccaggaatacgaccaa
tacggggatagttactttgtcgacacagatgtgcaccaactgaaggaagtgttttcggga
attaaaaactctggtgagcagactcctggggagatgagtcctgtgattgctgatttggaa
cacaggtattcctgggccagcatgcctcttagcatgtttagacaccacaccgtttatttg
gacttgtacgctgtgatcaatgacttaagtaccagaatcaagggagctaggttagccatc
acagccttggagcttcgatttcatggagcgcaagtagtttcctatttagctgagggagtg
tctcacgtcattgttggggaagatcagagtcgggttgcagacttgaaagctattcgaagg
actcttaagaggaaatttaaaatcttacaagaacgttgggtcactgtttcaatagacgag
tgtgaattacaggaggaaaatcagtatttggtttga

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