KEGG   Pantholops hodgsonii (chiru): 102326835Help
Entry
102326835         CDS       T02909                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
phd  Pantholops hodgsonii (chiru)
Pathway
Alcoholism
Human papillomavirus infection
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:phd00001]
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    102326835 (HDAC6)
  Substance dependence
   05034 Alcoholism
    102326835 (HDAC6)
  Infectious diseases
   05165 Human papillomavirus infection
    102326835 (HDAC6)
Enzymes [BR:phd01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102326835 (HDAC6)
Protein phosphatases and associated proteins [BR:phd01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102326835 (HDAC6)
Messenger RNA biogenesis [BR:phd03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     102326835 (HDAC6)
Chromosome [BR:phd03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102326835 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1129 aa AA seqDB search
MTSTGQDSTTPKERRSRHNPHSPTHDSSITSKRGIKKGAILRSSPSLAEVKKKGRMKKLN
QTAEQDLIMGLQGLNLNLEARTLSGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQG
QGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCLSA
QASLSCALEALEPFWESLVRSVESLEEKDTVEKDDVEEKEEEKLPQSSELSVPIWPVLQA
RTGLVYDQRMMEHYNLWDNYHPEMPQRIHCIMHHLDELGLAKRCHSLPARPATDAELLTC
HSAEHLERLRATEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVL
NGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHI
FEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGDADYLAAW
HRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGHIILILE
GGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQDSITKTIQVHRRYWRSLRVMKR
KNIEGLSSSKLITKKPSQPASSELANVTTTVEGNILGAGMGQAASEASVKESTPDQTESA
TAPVELTQGQSSDTATQGAALDQTISEGATGGAELIQNPPASCINNRIPPALPVQRATTQ
TSPSKLTANLRILDLDSTTQEPSEEEGLLGEAAGGQDTNESVPVQVFGDHADTDQVMFYA
VRPLLWCPHLAAVCPIPETGLNVTQPCQDCGTLQENWVCLSCYQIYCGRYINAHMLQHHE
GSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHQNKFGEDIPHSD
NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt
atgacctccaccggtcaggattccaccacacccaaggagcgaaggagtaggcacaatccc
cactcccccacccatgactccagcatcacctcgaagcgaggtattaaaaagggtgctata
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttaac
caaacagccgagcaagacctaatcatggggctgcaagggctgaatctgaacctggaggcc
aggacactgtctggcactggcttggtgttcgatgaacagctaaatgaattccactgcctc
tgggatgacagcttcccggaacgcccagagcggctccatgccatcaaggagcaactgatc
caggagggcctcctggaccgctgcgtgtcgtttcaggcccgattcgccgaaaaggaggag
ctgatgttggttcacagcctagaatatattgatctgatggaaacgacccagtacatgaac
gagggggagctccacgtcctcgcagatacctatgactcagtttatctgcatccgaactca
tacacttgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctggag
gctgagatccggaatggcatggccatcatcaggcctcctggacaccatgcccagcacagt
ctcatggatggatattgcatgttcaaccacgtggccgtggctgcccgttatgctcaacag
aagcatgatattcagagggtccttatcgtggattgggatgtgcaccatggtcagggaata
cagttcgcctttgaccaagatcctagtgtcctctatttctccatccaccgctatgagcaa
ggtcggttctggccccatcttaaggcctctaattggtccaccacaggtttaggccaaggc
cagggatacaccatcaacgtgccttggaaccaggtggggatgcaagatgctgactacatt
gccgctttccttcacgtcctcctgccagtcgcatttgagttccagccccagctggtcctg
gtagccgctggatttgatgccctccaaggggaccccaagggtgagatggctgccactcca
gcagggttcgcccagctcacccatctgctcatgggtctggcagaaggcaagctgatcctc
tcactggagggtggctataatctccgctctctggctgaaggtgtcagcgcctccctccac
acccttctgggtgacccttgtcctatgttagagtctcctggtgccccctgcctgagtgcc
caggcgtcactctcctgtgctctagaagccctggaacccttctgggagagccttgtgaga
tcagttgagagcctggaagaaaaggacactgtggagaaggatgatgtggaagagaaggag
gaagagaaactgccacagtcctctgagctctccgttccgatatggccggtgctgcaggct
cgcacggggttggtctatgaccaacggatgatggagcactacaacttgtgggataactac
caccctgagatgccccagcgcatccactgtatcatgcatcacctggacgaactgggcctt
gccaagcgctgccactccctgcccgcaaggcccgctacagatgctgagctgctcacctgc
cacagtgctgaacacttggaacgtctgcgggccacggagaagatgaagacccgggagctg
cgccgtgagggcgccaactatgactccatctacatctgctccagcacttttgcctgcgca
cagctggctgcaggcgccgcctgtcgcctggtggaggcagtactggcaggagaggtcttg
aatggtgttgctgtagtgcgacctcctggccaccatgcagagccggatgcagcttgtggt
ttctgtttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcat
gcactgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcacata
tttgaggaggaccccagtgtgctgtacatttccctgcaccgctatgatcatggtaccttc
tttcccatggggaatgagggtgcctgtacccggataggtaaagctacaggcacaggattc
actgtcaatgtggcctggaatgggccccgcatgggtgatgctgactacctggctgcctgg
caccgtctggttcttcccattgcttatgagtttaacccagaactggtgctggtctcagct
ggtttcgacgctgctcggggggatcctctgggcggctgccaggtgtcgcctgagggctat
gcccacctcacccacctgctgatgggtttggccaatggccatatcatcctaatcctagag
ggtggctataacctgacgtccatctcagagtccatggctgcctgcactcgctccctcctt
ggggatccactgcccctgctgacccggctgcggcccccactatctggagcccaggattct
atcactaaaaccatccaagtccatcgaagatactggcgcagtttgcgggtcatgaagcgc
aaaaacatagagggactgtccagttctaagttgatcaccaagaagccatcccaaccagcc
agttctgagttagccaatgtgacgaccacagtggaagggaacatcctgggggcaggcatg
ggacaggccgcctcagaagcatctgtgaaagagtccactccagatcagactgagtcagcg
acagctccagtagaacttactcagggccagtcctcagacacagccacacaaggagctgca
ctggaccagaccatctcagagggggccacaggaggagctgagctgatccaaaaccctcca
gcctcatgcatcaacaacaggattcctcctgccttacccgtgcaaagagccacaacccag
acatcccctagtaagctgacggcaaacctcagaatattggacctagatagcacgactcag
gagccctcagaagaggaaggactactaggagaggcagctggaggtcaggacacaaatgag
tcagtgccagtgcaggtctttggagatcatgctgacactgaccaggtcatgttttatgct
gtgagaccactgctttggtgtcctcatttggcggcagtatgccccatacctgagacaggg
ctgaatgtgacccaaccttgtcaggactgtggaacactccaagagaactgggtgtgtttg
tcttgctatcagatctactgtggtcgttacatcaatgctcatatgctccaacaccatgaa
ggttcgggacacccactcgtactcagctatgccgacctgtctgcctggtgttaccactgt
caggcctatgtccaccacaaggatctcctagcagtgaagaacatcgcccaccagaacaag
tttggggaagacataccccattcagactaa

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