Pseudopodoces humilis (Tibetan ground-tit): 102099599
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Entry
102099599 CDS
T02921
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102099599 (RC3H1)
04121 Ubiquitin system [BR:
phi04121
]
102099599 (RC3H1)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102099599 (RC3H1)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102099599 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
zf-RING_10
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
102099599
NCBI-ProteinID:
XP_014117443
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLRSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSSYETALKPGKMDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPARAPADLPSVSVTKQLQMVPRGSQLYSAQQADIFYQDPRGA
APSFEPAPYQQGVYYPTQSMSRFVRPPPSATEPGIPYLEHYGPYLPERVVSPQYPQPQGY
PTLAQPMYPPHYDSRRVYPPVQPYQREDVVRGSPVPIDIPQAAVPLYVPESRDRYQQTEA
YCAVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHPE
EIFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANV
DSKAMREQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAVYQNSGPMQALAVQG
AATKSIISDYSPYETHSGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAERE
QQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREVTTLAGQPQPPPPPPKWPGMISSEQ
LSLELHQVEREIGKRTRELSMESQSSLDMKNKLGTTKQTENGQLEPQNKVPAEDLTLTFS
SDVTNGSALTQDSIGLLSNNMASLSLSEDPKGGGDGHDSQRVGVTPTSAP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact
tttgacgaaactatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgtccctttgaccagaccactatcaacacagac
attgaactccttcctgtgaactcagccttgctgcaacttgtgggtgctcaggttcctgag
cagcagccaattactttacgcagtggagctgaagatactaaacattatgaggaaggcaag
aaatgtgtggaagaactggcattgtacctcaaaccactcagcagtgcaagaggtgtgggt
cttaacagtactactcagagtgtgctgagtcgtcccatgcagaggaaacttgtgacatta
gtccattgccagctggtggaggaggaagggcggatcagagccatgcgtgcagcacggtca
ctaggtgaaagaacagtcacagagctcattcttcagcatcaaaaccctcagcaactttcc
tccaacctctgggctgcagtgagagccagagggtgccagttccttgggccagcaatgcaa
gaggaggctttaaaactagttctgctggctttggaagatggatctgctctgtcacgaaag
gtcttggttctctttgtggtgcaaagactggagccgcgattccctcaggcttccaaaact
agcattgggcatgttgtccagctcctttacagagcctcatgcttcaaggtgaccaagcga
gatgaggattcctccctgatgcaactgaaggaggaatttcggacttatgaggctctgaga
agggaacatgattcccagatagttcaaatagctatggaagcaggtttgcgcattgcacca
gaccagtggtcctcgctgttatatggagaccagtctcacaaatcccacatgcagagtatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattaactattgct
cttcagaggaccggagatccagctaacttgaatcgtcttcgacctcacctagagcttcta
gcaaatattgatccaagtccagatgctccacctccaacatgggaacaactggaaaatggg
ctagttgctgtgaggactgtagttcatggcttagttgattatatccagaatcacagcaaa
aaaggaacagatcaacaacagccccctcagcacagcaagtacaagacatatatgtgccga
gacatgaagcagagaggaggatgtccgcggggggccagctgcaccttcgcacactcacag
gaggagctggaaaaattccgtaaaatgaacaagcgtctcgttcccagaagaccccttagt
gcttccctgggccagctgaatgaggtgggcctgccttcaggagctatcctctcagaggaa
gggggagtggacttgcccaataggaaaacttctgctctgccaaatggaattgtatcaaca
ggcagcacagtgacgcaactaatttctcgagggactgactccagttatgaaactgccctg
aaaccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgttg
gaatctgttcccaagagctctatttctgccttgccagtgaaccctcatcctgttcctgct
cgggcaccagcagatctgccctcggtgtctgtcaccaagcagttgcagatggtaccacga
gggtctcagttgtacagtgcacaacaagcagatatattttatcaagaccccagaggggcc
gccccatcgtttgagccagcaccctaccaacaaggagtgtactatcccactcagtccatg
tctcgctttgtccgacctcctccatcagcaaccgaaccaggtataccatacctggagcac
tacgggccatatttgccagagcgtgtggtaagcccacagtacccacagccacaggggtac
ccgaccctggcgcagcccatgtacccaccacactacgacagccgccgcgtgtaccccccc
gtgcagccctaccagcgggaggatgtggtgcggggcagcccagtgcccatcgacatccca
caagcagctgtacccctctatgtacctgagtccagagacagataccagcaaacagaggct
tattgtgcagtggctccacatcttggtcagatcagaccttcgtgccacaggcctcatccc
agtctggatgaacttcaccgacgaaggaaagagatcatggcccagctggaggagaggaag
gtgatttctccacctccttttgcaccatcaccaaccttgcctcatccttttcacccagag
gagatttttgtttttgtacagtacttggatgaagacctgaaggtagctgggaaatacaaa
ggaaatgactacagccagtactctccctggtcttgtgacaccatcggctcctacattgga
accaaagatgcaaaacccaaagatgttgtggcagcaagaagtgtggagatggcgaatgtg
gatagtaaagccatgcgtgagcagcgactggacatgcagcgacgagcagccgagacaggg
gacgatgacctcattccatttggagaccgaccaaccgtgtcaagatttggggccatctct
cgtacttccaaagccgtgtaccagaactctgggcccatgcaggccctggcagttcaggga
gctgccaccaaatccatcatttcagactacagtccttacgaaacccacagtggctgggga
ggctctccatattctcctcatcaaaatataccttctcagggtcgtttcaatgacagggag
agactgtccatgtcagatgtggctggtcatgggaagcagttgccctcagctgaacgagag
cagcagctacgcatggaactgcagcaagttgaccatcagatcagccagcagacacaaatg
cggggactggaggctgttagtaacaggctgctgttgcagagagaggtgactaccctggca
ggccaaccacaacccccacccccacctcccaagtggcctgggatgatctcaagtgagcag
ctgagcttggaactgcaccaggtggaaagggaaattgggaagcgaacccgtgagctgagc
atggagagccagtcttcactggatatgaaaaacaagctgggcaccactaaacagacagaa
aatggacaattagaaccacagaacaaggttccagctgaggaccttacactgacattcagc
agtgatgttacgaatggatcagctttgacccaagacagcattggcctcctgtcaaacaat
atggcatctctcagcctgtcggaggaccctaagggaggaggagatggccatgactcccag
cgagtgggagtgacacccacatctgctccatga
DBGET
integrated database retrieval system
