Pseudopodoces humilis (Tibetan ground-tit): 102100627
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Entry
102100627 CDS
T02921
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102100627 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102100627 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102100627 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phi00535
]
102100627 (COL9A2)
Proteoglycans [BR:
phi00535
]
Extracellular matrix (ECM) proteoglycans
Others
102100627 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102100627
NCBI-ProteinID:
XP_005529890
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MARVTRVTLVSQLWLLLQASCLCLAQLRGPPGEPGPRGPPGPSGVPGADGIDGDKGPAGA
PGSPGVKGEPGAPGPDGPPGKPGIDGLTGAKGEPGPVGRPGVKGQPGLPGPPGLPGPSLP
GPPGLPGQVGLPGEIGVLGPKGDPGPEGPRGPPGPPGKPGLPGHLQGLEGSADFLCPTSC
PPGPKGPQGLQGLKGHRGRPGALGEPGKQGEPGPKGDVGASGEQGVPGPPGPQGLRGYPG
MAGPKGETGPAGYKGMVGSIGAAGRPGREGPKGPPGDPGDKGELGGRGIRGPQGDTGPKG
ENGLPGIDGKDGTPGIPGVKGGTGQAGRPGTPGHRGQAGLPGQPGSKGGPGDKGEAGPRG
HPGVTGAPGQLGEPGPRGEQGPQGVPGLKGDRGERGLVGPPGEQGRVGPKGEQGPPGIPG
PQGLPGVKGDKGSPGKTGPKGSIGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGDLGFPG
PSGDAGAPGIRGYPGPPGPRGLVGERGVPGMPGPRGTAGRDAGDQHIVDVVLKMLQEQLA
EVAVSAKRAALGGVGAMGPPGPPGPPGPPGEQGPHGPMGPRGVPGILGAAGQIGNVGPKG
KRGEKGERGEVGRGHPGMPGPPGIPGLPGIPGHAVDGKAGERGLPGSPGEAGRPGLPGPP
GFPGFCEPAACLGASAYAAARLTEPGSVKGPLY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcacccgtgtcaccctcgtgtcgcagctctggctcctgctccaagcctcc
tgcctctgcctggcccagctccgagggcctccaggagagcccggcccacgggggcccccc
ggtccctcaggagtgccgggagccgatggcatcgacggtgacaaaggtcctgccggagcc
ccgggatccccgggtgtcaagggtgagcctggagcccctgggccggatggacctccaggg
aagccgggcattgatggcctgacgggagcgaaaggggagccaggacctgtcggcaggcca
ggagttaaaggccagcctggactcccagggccaccagggctccctggtccttcactgcca
ggaccccccgggcttccaggccaggttggacttcccggagagatcggggtgctgggaccc
aagggtgatcccggacccgaaggccccagaggtcccccaggccctccagggaaacccggc
ctcccgggacacctccaaggcctggaaggcagcgctgatttcctgtgccccaccagctgc
cccccaggtcccaagggcccccagggactgcagggactgaagggacacagaggccgcccc
ggggccctcggagagcccggcaagcagggagagccgggccccaagggagacgttggtgcc
tctggagaacaaggagtcccaggccctccgggacctcagggcctcaggggttatcctggc
atggcaggacccaagggagagacgggtcccgctgggtacaagggtatggtcggcagcatc
ggagcagcggggcggccgggcagggaaggccccaagggaccacctggggaccctggtgac
aagggagagctgggtggccgtggcatcaggggaccccagggtgacaccggccccaagggc
gagaatggcctcccaggcatcgacggcaaggatggcaccccaggtattcctggagtgaag
ggtggcacaggacaggccggacgcccgggaacgccgggacaccggggacaagctggattg
cctggccagccgggaagcaaaggtggcccaggtgacaagggtgaagctggtcctcggggc
caccccggtgtcaccggtgccccagggcagctcggtgagcccggacctcggggtgagcag
ggcccgcagggtgtccccgggctgaagggtgacaggggtgagcgtggcctcgtggggccc
cccggcgagcagggcagagtggggccgaagggcgagcagggcccaccgggcatcccagga
ccccaaggcttgccaggagtcaaaggagacaagggctctccagggaaaaccggccccaag
ggcagcattggagatccaggtgtccacggcttggcagggctcaagggagagaagggggaa
tcaggagagccaggacccaagggacagcaaggcatccagggagacctcggctttccgggc
ccttcgggggatgccggagcaccgggaattcggggttatcccggcccgcccggcccgcgg
gggctcgtgggggagcgcggagtgccgggaatgccggggccgcggggcacagccggccgg
gatgctggggaccagcacatcgtggatgtggtgctgaagatgctgcaagagcagctggca
gaggtggctgtgagtgccaagagagctgccctgggtggggtcggggccatgggaccccct
ggcccccccgggcccccagggccgcctggtgagcagggtccccacggccccatgggaccc
cgaggtgtccctggaatcctgggagctgccgggcagatcgggaatgtcggacccaaaggg
aagagaggagagaagggcgagcggggagaagttggccgtggccacccaggaatgccgggt
cctccagggatcccaggtctcccgggcattccgggccatgctgtggatggcaaagcaggg
gagcggggcctgccgggctccccgggcgaggctggcaggccgggattgccgggccccccg
ggattcccgggattttgcgagccggccgcgtgcctgggagcctcggcctacgcggccgct
cgcctcactgagccggggagcgtgaagggccccctgtactga
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