Pseudopodoces humilis (Tibetan ground-tit): 102113180
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Entry
102113180 CDS
T02921
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102113180 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102113180 (SMARCA2)
03036 Chromosome and associated proteins [BR:
phi03036
]
102113180 (SMARCA2)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102113180 (SMARCA2)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102113180 (SMARCA2)
Chromatin remodeling factors
BAF complex
102113180 (SMARCA2)
PBAF complex
102113180 (SMARCA2)
GBAF(ncBAF) complex
102113180 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102113180
NCBI-ProteinID:
XP_005522760
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPLSGGGPTPPQMTPSQPGPIIAGDPQAMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAATGP
GSAPGMPGHTTAITPKTWTEGQAPDMSVSNAQQKLPAPAPSGRPSPAPAAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQEENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagatcctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccgtctcctggctccgtt
cacagcatgatggggccaagtcctggtccacccagtgtcccacatccaatgccgacaatg
gggcctactgattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctccc
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttacatgtct
ccacacccatctccactaggagcaccagagcatgtgtccagtccactgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccagggcccattatagcaggagacccacaa
gctatgaatcagcctaacagagggccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccttaccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcccggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggtttacatgcgatgagtggtgctgcaactggacca
ggatctgcaccagggatgcctggacatacaactgccattacccctaaaacttggactgaa
ggccaagccccagacatgagtgtctccaatgcacaacaaaagcttccagcgccagctcct
agtgggaggccttctcctgctcccgctgctgcccagcctgctgccacaatgcctgggccc
tctgtaccacagcccccacctggacaaccttcacccattgtccagctgcagcaaaagcag
aaccgcatcagccctatccagaagccacaagggctggatcctgttgaaatacttcaagaa
cgtgaatatagacttcaggctcgaattgctcacagaattcaggaactggagaacttgcct
ggttctctcccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggcta
ctgaacttccaacgccagttaagacaagaggtggtagcctgcatgcgtcgtgacacaaca
cttgagacagcattgaactccaaagcctacaaacgaagcaagcgccagactttgagagag
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagaatac
caccggtcagttgctgggaaaattcagaaactttcaaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgaaaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgatcaaaagaaggacagacgc
ttggcttacctgttgcagcaaacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagagaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggacctgaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagatagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcaaattagaaacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcactgaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactgggaaagacaatacagactattgctctcatcact
tacctaatggagcacaaaagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatacgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcgatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaac
gttcttttaactacttacgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatagaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcgaattctgctgactgggactcctttg
cagaacaaattgcctgaactttgggctcttctcaatttccttcttccaaccattttcaag
agctgcagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgcttcggccc
ttcttgctgagaagactgaagaaggaggttgagtctcagctgccagaaaaggtggaatat
gtgatcaaatgtgacatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
ggaatcctcctcacagatggttctgaaaaagacaagaagggaaaaggcggagcaaaaact
cttatgaacactatcatgcaattgcgaaaaatatgcaatcacccctacatgttccagcac
attgaggagtccttcgctgaacacctgggctactcaaatggtgtcattaacggagctgaa
ctttatcgggcctcagggaagtttgagctacttgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgcaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgttaaagaagttcaatgaacctgggtcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacaccgttataatcttt
gacagtgactggaatcctcatcaggacttgcaggcccaggacagagctcaccgaattggt
cagcagaatgaagttagagtcctgcggctgtgcactgtgaacagtgtggaagagaagata
cttgctgcggccaagtataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagcattcctacaagctatactggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cggcgtgaagaggaatttgatctttttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaagcgtaaacctcgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaggaggaagagaaaatattt
ggaagaggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaagcag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaggtccgacttaaa
aagcgaaaaaggcgaagaaacgtggacaaggattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcgcccaatccacccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccatctaggaaagaactaccggagtattatgaattg
attaggaaaccagtggatttcaaaaagattaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagacgtcatgttgctgtgtcacaatgcgcagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaagaagaagaatcggaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagaggaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
