Pseudopodoces humilis (Tibetan ground-tit): 106628688
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Entry
106628688 CDS
T02921
Symbol
ALMS1
Name
(RefSeq) Alstrom syndrome protein 1
KO
K16741
alstrom syndrome protein 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
106628688 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phi03037
]
106628688 (ALMS1)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
106628688 (ALMS1)
Cilium and associated proteins [BR:
phi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106628688 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
106628688
NCBI-ProteinID:
XP_014116594
LinkDB
All DBs
Position
Unknown
AA seq
2938 aa
AA seq
DB search
MRARGERESECESLATARPRQRAGRERGDTGHGTRGHTDTAAPSRPTAMEHSRQEEEEAE
ERTVGSWLCLVESGCTDQAEFPTLEEGLLSSAQASPGAPAPASPLAGKDGHPSGHSGHPS
GHSGHSSGHSGHSSGHSGHPSGHSGHPSGHSGHSGHPSGHSGHSSGHSGHSSGHSGHSSG
RSSQGSNGPAAASELSERDKESPRQEEESSSSGNSSYKTALTKFSEKSERGAWQEKVKVL
GSGVLEKQEKGKKVPELGLLNNFSDGWRKDRSGRWGAEGAPCAAAPEPGQGPGQEGGLQL
PAGPRGWGLTAAPEELLPAILSQPAARLGTEEPAVPPSQPQDTAGSTSGCPGHCPGGAEP
AAGSDELTGSELSIERGHKVTEISPSFSLGAEGSFSLHLARPNFQSTPGVFLEKTGKAEG
RGVPAIPSHLRASLSRSDEETSGESPAPGPGKEDPAQSAVEESCGHLESLRLESPGCGRI
QSCPALGFLEKVGAWHVSQPEQVPDSSGVPGALPPARKASSSLPRAASCILAGQRSPGDP
KDCAAPSSSGAGSLGSWHFPHEGLLLGPARGRSRSDASLSSCRESRALVRASPACSESRT
SSRTSVRTSPACSESRTSVRTSPACSESRTSVRTSPACSEEPPGHPSPTVGCSQSSSMGS
LARRAGAGHGDARRSSAPDVFVCGVAQLLTKHKDCEEKENRSLKLNIPTGHDIMENFGAV
SLENLDFPVGSGEPQGAPGCGLGSLVVPRPCPSAGENSSIPPGAALQTPEKEEFNIEERI
PIYLRNLGIEQSPGSILAPFVPRRPLWELEFSPSELRSLQDPVGCLARVPPQAQGTLLPA
FQMSEAGFGRAASPGSVSLPGGSEAVLSPRELSGEHPESQGSVPGPQPGLAVPTSPARGA
EGSPGSAGAEQDVPSCSSGRDGAGDGGTSARVPFAGREPWSLQGWAAGALSGAGNGVELD
RGSQSCSGGSESSQGWEGDSPMGSGALRELRELLARAEDLAAGWGRPAFPSAARTETGEA
PPALPGREPDPGEPRLGKERIPEPRGAEPVTQRGVRGEGLGFHPPDPGSCHRGRGDPSAV
SLQRREGLRGAAQRPRPGRAEPEGCSAVPRSQAVLVGLAQSGASSALSSAPQPGPPPLQP
PGTGPALPGGSRGSVGRAGGAEGTRGSSSEDSSSGDSLGARVRSLLGSTGAQPGTFQDSS
SGDSLGARVRSLLGSTRAQPGTFQGALQDSSSGDSLGARVRSLLGSTRAQPGTFQGALEN
SSSGDSLGARVRSLLGSTRAQPGTFQGALQDSSSGDLLGARVRSLLGSTRAQPGTFQGAL
QDSSGDSLAARVRSLLGPAAPGTAAHQILRDAEEQERKIRAWVKLKLASQSQESGPDRDE
ETQHRMEGMKAELFPKTRESAQAKDPWLCGLGAGSEYLRKQEQDQERFQAPRFPRDRHRQ
TDRQLFQSGSPPAVPVPRADPWDCSLLQDVQLNLWGPAGLQDMQLETRRTDGLQDMQLKP
WNSSGLQDMQLKPRSTAGLQNMQDMQLKPRSTAELQDMQDMQLKPQSTAGLQDMQLKPRS
TAGLQNMQDMQLKPRSTAELQDMQDMQLKPQSTAGLQDMQLKPRSTAGLQNMQDMQLKPR
STAELQDMQDMQLKPQSTAGLQDMQLEPQSTAELRVCEQHRAMEHCSAVAELCAPLAGDP
CAGSGAAAPRARGQPGEPSSSVTLCSWRRAPAPLGSRARSPSLARDGILPGEAPCARPGE
ERLATEPWERIQSCPPSPTLARSREAGDAAELPPVPAASAGAPQGTAWGPGSIHTGQTQS
LGAQQPQIPAAAVAGGHGQSTGAAGLRCGTAQEINAVLEPRSVSSPQQQEIPAGHTQLCD
SSKGSGPAAQGGLEKGSGAAAQGGLEKGSGAAAQGGLEKSPSEVLAEGRKSPAEAALVPE
QASSHPLPAEEALSSTSEAPSSAVRRFLSCVHITLSSRADRSELRGAGTAGAGMGLWDKP
QVKAQAATLKAAPEASVESVPKFSPAEGIPEDPSPAVPVADPSQAFPPRQELLLLLRGSG
ARGAEGIPSSAPPAKPGRRTSDAATQITTESPTKTSFSAEICLDAWQGGNAAQHSSLPRA
PEAPGVPASSHREIPPFPRQPAQPLLLPYKPLGSAGMYYVPCQRSGASVSPETSEASGNS
SHSGSEDAAAVLLARVLALGDDSPPARAAAQHRGTSHGHRAKLAWAEEQGTPLEQSSELP
DGSGRVKPSGCAPDPASGSCCPAPRHLCGVSAGAGHAVPSSGAVPAGSRRQGPRAPPGTG
RQLSALPAEADDSGSEEPGAAFGNGMEPQPDAAGRDPAPPGPAAESRGKAARQRSRPRGS
LGELWVTFLERQSRQQQDFGESGELSLVERLERLARLLQNPIRHALAPAAAGEKVPEGCP
QGRERLKILLAGGGRSGSGTEPRGTRAGRRPRVIQEELGAHRPGQKVIQHLKRILEQQQQ
LGIASDSSSEARLSAEPGGCSSCSTSGWDTGTPAGLDTSPASGDSSSLSLATIDTARLLR
AFGQHRLGLELPPRLAQLYCAISQQKSRSERWDEESEGAGAESLGKGQQSQSTIPFSSDS
TCASSSSWGPSSALRNKRRTRMLNKGIQAGDLEIFSSGTRRNTRDVGVTFPTPRHSQEPV
GHSQEPVGHSSQELRGHSQEPTGQSQQLTGHIQEPTGHGQELRGHSQEPTGHGQEPRGHS
QQLTGPRHAVPGTWQRAPTDRLPTDRRTRSSRLHLQQGTQWLIPAEDLKCEWRKENQSSA
IPGPGPAWFEPWSSTKPWREPLREKNWEQQPSLGRAGAGRGLGQPLGKLTLQEALALHRP
DFISRSGQRLRHLRLLREERRLQRLLQSQREQLLQPPGKRQACRTANHRGFLMKEKRRAI
PKREMFQRSKRLYEQLPEVRRKREEEQRKLEYSSHRLQARLYRTKITNRVLGKKVSWS
NT seq
8817 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcggggcgagcgcgagtccgagtgcgagtccctggcgacggcgcggccccgg
cagagagcgggacgggaacgcggggacacgggacacgggacacggggacacacggacaca
gcggccccgtcccgtcccaccgccatggagcacagccggcaggaggaggaggaggcagag
gagcggactgtgggctcgtggttgtgcctggtggagagcggctgcacggaccaggccgag
ttccccacgctggaggaagggctgctgtcctcagctcaggcttctcctggagctccagcc
cctgcctcgccgctggctgggaaggatggacacccctctggacactctggacacccctct
gggcactctggacactcctctgggcactctggacactcctctgggcactctggacacccc
tctggacactctggacacccctctggacactctggacactctggacacccctctggacac
tctgggcactcctctggacactctggacactcctctggacactctggacactcctctgga
cgctcctcccagggcagcaatggcccagctgctgcctctgagctgtcagagagggacaag
gagtccccaaggcaggaggaggaatcctcatcctcaggaaactcctcctataaaactgca
ctgaccaaattctcagagaaaagtgaaaggggggcgtggcaggaaaaggtaaaagtgctt
gggagtggagtcctggagaagcaggaaaaaggaaagaaggtgcctgagcttggtttgttg
aataatttctctgatggctggaggaaagaccgttctggaaggtggggagctgagggtgct
ccttgtgcagcagcccctgagccgggccaggggccggggcaggaaggggggctgcagctg
cccgctggccccaggggctgggggctcacggctgctcccgaggagctgctgccagcaatc
ctgagccagccagcagcgaggctgggcacagaggagccggctgtgccccccagccagccc
caggacacggctgggagcacctcggggtgccctgggcactgcccggggggagcagagccc
gccgcaggcagcgatgagctgaccggctccgagctctccatagagaggggacacaaagtc
acagagatctccccttccttcagcctgggagctgagggctccttctccctgcacctggct
cgtcccaacttccagtccacccctggggtgttcctcgagaaaaccgggaaggcagaagga
cgtggagtcccggcgatcccttcgcaccttcgggcctctctttcccgttcagatgaggaa
acctcgggggagtcccctgcccctggaccagggaaggaagatcctgcccagagtgcagtg
gaagaaagctgtggacatttggagtccttgaggctggaatcccccggctgtggcaggatc
cagtcctgcccggcgctgggtttcctggagaaggtgggagcctggcacgtgagccagccg
gagcaggttcctgacagctcaggtgtcccaggggcgcttccccctgcaaggaaagcctcc
agctcacttcccagggctgcaagctgtattttagcaggacagaggagccctggggatccc
aaggactgcgctgctccctcctccagtggggcaggttctctgggcagctggcatttccct
cacgaaggcctcctgctcggtccagctcggggcagatcccgctctgacgcctccctgagc
tcctgcagggagagcagagccttggtcagagccagcccagcctgcagtgagagcagaacc
tcgagcagaacctcggtcagaaccagcccagcctgcagtgagagcagaacctcagtcaga
accagcccagcctgcagtgagagcagaacctcggtcagaaccagcccagcctgcagtgag
gagcctccaggacaccccagccccaccgtgggatgctcccagagctcctccatgggctcc
ctggcacggagggctggagctgggcacggcgacgccaggcgaagctcggccccagatgtg
ttcgtgtgcggcgttgctcagctccttacaaagcacaaggattgtgaggaaaaggaaaat
cggtccctcaagctgaatattcccactggacacgatatcatggaaaactttggagctgtt
tccttggagaatttggattttcctgtcggttctggggagcctcagggggccccaggctgt
ggtttgggctccctggtggtgcccaggccctgccccagtgcaggagagaacagctccatc
ccccccggagcagcgctgcagactcctgagaaagaagagtttaatattgaggaaaggatc
ccgatctacctgcggaacctgggcatcgagcagtcccctggcagcatcctggcgcccttc
gtgccccggaggcccctgtgggagctggagttctccccctcggagctcaggagcctgcag
gatcctgtgggctgcctggccagggtccccccgcaggcacagggtactctgctgccagcc
ttccagatgtcagaggccggctttggcagggcggcatccccggggagcgtgtcccttccc
gggggctctgaggcggtgctgtccccccgggagctgtccggggagcacccagagagccag
ggcagtgtgccgggtccccagccggggctggctgtccccacgtccccagcccggggtgca
gagggttccccgggatctgctggagcggagcaggacgtgcccagctgctcctcgggcagg
gacggtgccggggatggggggacgagtgctcgggttccctttgctggccgtgagccctgg
agcctgcagggatgggctgctggggctttgtctggagctgggaatggagtggaattagac
agagggtcccagagctgcagcgggggaagtgagagcagccaggggtgggaaggagattcc
ccgatgggctccggggccctgcgggagctgcgggagctgctggcacgggccgaggatctg
gctgccggctggggccggcctgccttcccctcagctgcccgcacggaaaccggggaggct
cccccggcactgcctgggagggagcccgatcccggggagcccaggctggggaaggagcgg
atccccgagccgcggggggctgagcccgtcacccagaggggtgtgcggggagaggggctg
gggttccaccctccggatcccggcagctgccaccggggacggggagatccctcggctgtc
agcctgcagcgccgggaagggctgaggggagcggcccagcggcccaggccgggcagggca
gagccagaggggtgcagcgctgtgcccaggagccaggctgtgctggtggggctggcacag
agcggagccagcagcgccctgagctcggccccacagccgggccctcctcccctgcagccc
ccgggcaccggccccgctctcccgggcggctcccggggctctgtgggccgggctggaggg
gcggaggggacacggggcagcagcagcgaggacagcagcagtggggattcgctcggtgcc
cgtgtcaggagcctcctgggcagcaccggggcacagccgggcacgttccaggacagcagc
agtggggattcgcttggtgcccgtgtcaggagcctcctgggcagcaccagggcacagcca
ggcacgttccagggggctctccaggacagcagcagtggggattcgctcggtgcccgtgtc
aggagcctcctgggcagcaccagggcacagccgggcacgttccagggggctctggagaac
agcagcagtggggattcgcttggtgcccgtgtcaggagcctcctgggcagcaccagggca
cagccaggcacgttccagggggctctccaggacagcagcagtggggatttgctcggtgcc
cgtgtcaggagcctcctgggcagcaccagggcacagccaggcacgttccagggggctctc
caggacagcagcggtgactctctggccgcccgcgtccggagcctcctggggccggcagcc
ccgggcaccgccgcccaccagatcctcagggacgccgaggagcaggagaggaaaatccga
gcctgggtgaagctgaaactggccagccagtcccaggagtctgggccagacagggatgaa
gagacccagcacaggatggagggaatgaaggcagagctgttcccaaagaccagggaatct
gcacaagccaaggatccgtggctctgtggtttgggagcaggttctgagtatctgaggaag
caggaacaggaccaggagcgtttccaggctcccaggtttcccagggacaggcacagacag
acagacagacagctcttccagtccggctccccaccagcagtgccagtccctagagctgat
ccctgggattgctccctgctgcaggacgtgcagctcaacctgtggggtcctgctgggctg
caggacatgcagctggagactcggagaacagatgggctgcaggacatgcagctgaagccc
tggaattcttctgggctgcaggacatgcagctgaagccccgtagcactgctggcttgcag
aacatgcaggacatgcagctgaagcccaggagcactgctgagctgcaggacatgcaggac
atgcagctgaagccccagagcactgctgggctgcaggacatgcagctgaagccccgtagc
actgctggcttgcagaacatgcaggacatgcagctgaagcccaggagcactgctgagctg
caggacatgcaggacatgcagctgaagccccagagcactgctgggctgcaggacatgcag
ctgaagccccgtagcactgctggcttgcagaacatgcaggacatgcagctgaagcccagg
agcactgctgagctgcaggacatgcaggacatgcagctgaagccccagagcactgctggg
ctgcaggacatgcagctggagccccagagcactgctgagctgcgagtgtgtgagcagcac
cgagccatggagcactgcagtgccgtggcagagctctgtgcccccctggcaggggatccc
tgtgcagggagcggtgcagctgccccccgtgcccgcgggcagccgggcgagccgagctcc
tccgtcaccctctgctcgtggagacgggcgccggccccgctggggtcccgggcacgcagc
cccagcctggccagggacgggatcctgccgggggaggctccctgtgctcgccctggggag
gagaggctggccacagagccctgggagaggatccagagctgtccccccagccccacgctg
gcccgctcccgggaggctggagatgctgcagagcttcctcccgtccccgctgccagtgct
ggagctcctcagggaacagcctgggggcctgggagcatccacactgggcaaacacagagc
ctgggtgcacagcagccccaaatcccggctgcagctgtggctggggggcacggacagagc
accggggctgcggggctgcgctgcggcacggcacaggaaataaatgcagtgcttgaaccc
cgctctgtcagctcaccccagcagcaggagatcccagctgggcacacccagctctgtgac
agctccaagggctcgggtccagctgcacaggggggtttggagaagggctcaggtgcagct
gcacaggggggtttggagaagggctcaggtgcagctgcacaggggggtttggagaagagc
cccagtgaggtgttggcagagggcaggaaaagccccgctgaggcagctctcgttccagaa
caggcttcttctcaccctttacctgcagaggaggctttatccagcacatctgaggctccc
tcatcagcagtgaggagattcctgagttgtgtgcacatcaccctctcctccagggccgat
cgctccgagctgcgcggcgccgggaccgctggagctgggatggggctgtgggacaaaccc
caagtgaaggctcaggcagcgactttaaaagcagctccagaagcttcggtggaaagtgtt
cctaaattctcacctgctgagggtattccagaggatcccagcccagctgtgccagtggca
gatcccagccaggcgtttccccccaggcaggagctgctgctgctgctccggggctcaggg
gctcggggtgcagaggggatccccagctctgcccctcctgcaaaacctgggagaaggact
tctgatgctgccactcagatcaccacagaaagtcctacaaagaccagcttctcagcagaa
atctgccttgatgcctggcaggggggaaatgctgcccagcactcgtcgctccccagagcc
cctgaagctcccggcgttccagcctcatcccacagggagattcctcccttcccaaggcag
cctgcccagcccttgctgctgccctacaagcccttgggaagtgctggcatgtattatgtg
ccctgccagagatcaggagccagcgtgtccccagagaccagcgaggccagcggaaacagc
tcccactcagggtccgaggatgcggctgcagtgctcctggcccgagtgctggccctgggg
gacgattcccctccagccagggcagctgcccagcacagagggacaagccatggccacagg
gctaagctggcctgggctgaggagcaggggacaccactggaacagtcttcagagctccca
gatggctccgggcgtgtaaaaccctccggctgtgcccctgaccccgcgagcggcagctgc
tgcccggctccccggcacttgtgcggggtctctgctggagcaggacacgctgtcccctcc
tcgggggctgtcccggccgggtcacggcggcagggtccccgtgcgccccccgggacgggc
cggcagctctcggctctccccgcagaggccgatgacagcgggagcgaggagcccggcgca
gcctttgggaacgggatggagccgcagccggacgctgctggaagggatcctgcaccgccc
ggcccagcagctgagagccgggggaaggcagcacggcagaggagccgccccaggggcagc
ctgggggagctgtgggtgacgttcctggagcgccagagcagacagcagcaggatttcggg
gagagcggagagctgtccctcgtggagcgcctggagcggctggccaggctcctgcagaat
cccatcaggcacgccctggcaccggcagcagctggggagaaggttcctgaggggtgcccg
cagggaagggagcggctgaaaatactgctggcaggaggaggcaggtctgggagcggcacg
gagccccggggaacgcgagcgggacggaggccacgggtgatccaggaggagctcggggca
cacaggccggggcagaaggtgatccagcacctgaagaggattctggagcagcagcagcag
ctgggaattgcgagtgacagctcctcggaggccaggctgagcgcagagcccggcggctgc
agcagctgcagcacctcggggtgggacacggggaccccggcggggctggacacctccccg
gcctctggggacagcagctccctgtccctggccaccatcgacacggccaggctgctccgg
gcctttgggcagcacaggctggggctggagctgcccccgaggctggcccagctgtactgt
gccatcagccagcagaagagccgctcggagcgctgggatgaggagagcgaaggagcaggg
gctgagagcctcgggaaggggcagcagagccagagcaccatccccttttcctcggattcc
acttgtgccagcagcagctcctggggaccgagctctgccctcagaaacaagcgacggaca
cggatgctgaacaaagggatccaggcaggagacctggagattttcagcagcggcaccagg
aggaacaccagggacgtgggggtgaccttccccacgcccaggcacagccaggagcccgtg
gggcacagccaggagcccgtggggcacagcagccaggagctcaggggacacagccaggag
cccacaggacagagccagcagctcacagggcacatccaggagcccacagggcacggccag
gagctcaggggacacagccaggagcccacagggcacggccaggagcccaggggacacagc
cagcagctcacaggacccaggcacgctgtccctggcacctggcagcgggcacccacggac
aggctccccacggacagacggacaaggagcagcaggctgcacttgcagcaagggactcag
tggctcatcccagcagaggacttgaaatgtgaatggaggaaagaaaaccagtccagtgcc
attcctggccctgggccagcctggtttgagccctggagcagcacaaagccctggagagag
cccctgcgggagaagaactgggagcagcagcccagcctgggccgggcaggggctggcagg
gggctggggcagcccctggggaagctgacactgcaggaggccctggccctgcaccgcccc
gatttcatctcgcgctcgggacagcgcctgcggcacctgcggctgctccgcgaggagagg
aggctccagaggctgctgcagtcccagagggagcagctgttgcagcctccagggaagaga
caggcctgcaggactgcaaatcaccgaggtttcctgatgaaagaaaaaagaagagcaatt
cccaagagagaaatgtttcaaagatctaaaaggctctacgagcagctccccgaggtgagg
aggaagagggaggaggagcagaggaagctggagtacagctcccaccgcctgcaggctcgg
ctctacagaactaaaatcaccaaccgtgtcctggggaagaaggtgtcctggagctga
DBGET
integrated database retrieval system
