Scheffersomyces stipitis: PICST_57110
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Entry
PICST_57110 CDS
T01023
Symbol
FUN30
Name
(RefSeq) helicase of the Snf2/Rad54 family
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_57110 (FUN30)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
PICST_57110 (FUN30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
4837990
NCBI-ProteinID:
XP_001383600
JGI:
57110
UniProt:
A3LSI2
LinkDB
All DBs
Position
3:1645541..1648939
Genome browser
AA seq
1093 aa
AA seq
DB search
MSWYKKDRPGIRPETEKTPKKENYVQVPSSSPIQIKSSPQQPSLLPPSLNSKYSLSEKER
QLETKRQAIRQHKDFSVVRKRFYYLKESDIFKGFVKGKGNLREITQWLTDNYNKAEILGK
EEEERRRQRDEAERVKQKQLEDRMKHEYEKREELGISDDDDDVEEVDDVDDEDEDDDEDS
LPIKMRGRVGIKREDRSPTKDAIRHTFSSQEHSTKVVSSKPRVSILDKYKFKSKSQPTLD
HFRGASDLQPKRRKLVRASALEDDSASSSATGSPMSAPNSLAASFAYQSDSVPKMKKTIL
ADNDDDLSDMIVADDDLERLEEKIKQNIKAKRAQKNEIVTVSDDELEEDDISDDMSEEDD
ENNYQTGITSIDNQILEFLNDAPVDDLIEICTLEPEVAKFVISQRPFNTIYDVSENNFEP
EDEAKAKNSSRRRKTLGLRIIESTEFSLKGYKAVDSLIKTCSKYGTSISNQINTWGVTTT
GQGELSVTDIDPADDEVKEIIDLDEENDDDEEEVVVTHYKKKGLRYIKHKPALLADEITL
NNYQQVGINWLNLLYQNRLSCILADEMGLGKTCQVIAFMAHLKQTEEKKGPHLVVVPAST
LENWLREFNKFCPDLKVQAYYGTVKEREDLRYELREIDFDVLVTTYTLAAGSPLDFKFLR
SQNFNIIVYDEGHFLKNSGTERYNRLMKLQAKFRLLLTGTPLQNNLKELVSLLSFMLPKL
FNEKKEDLQGLFNQKMGKVTSSSKSDNYNPLLSIQAIRKAKTMMTPFVLRRRKDQVLQHL
PAKCHEIVKCDLSKDQRSIYDELYNKAKSTRSERERRKLLSSKEQVELNKKQPIESSSNV
LMALRKASLHPLLFRIQYTDEKLAKMAKAIMNEPEYVEANQTYIFEDMQVMSDYELNNLC
AKFPKTMSPYKLNEDAFLNSGKVLELQKTLKLIIEGRQEKVLIFSLFTQVLDILERVLTQ
FKYKFVRLDGATSVESRQDIIDEFYDDETIPIFLLSTKAGGFGINLIAANNVIIFDQSFN
PHDDKQAEDRCHRVGQKKEVTVYKLIVNDTVEENMLKLAENKLQLDQTISAEGAEEAKFE
EKAASLFEKLLFE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtacaagaaagatcggcctggaatcaggcccgagaccgagaaaactcccaaa
aaggaaaattatgtccaagttccactgtcttcgccgattcagatcaagtcgtcaccacaa
cagccttcacttctaccaccatctcttaatagcaaatatctgttaagcgaaaaagaacgc
cagctagaaactaagagacaggctatcagacagcacaaagatttttctgtcgttcgcaaa
cgtttctactatctcaaagagagtgatattttcaaaggctttgtcaagggcaagggaaat
ctccgtgaaatcacccaatggcttactgacaattacaacaaagccgaaatcctaggaaag
gaagaagaggaacgtagacggcagcgcgatgaagcggaaagagtgaaacagaaacagtta
gaagaccgtatgaagcatgaatatgagaaacgcgaagagcttggaatctcagatgatgat
gacgacgtcgaagaagttgatgatgtagacgacgaagacgaagacgatgacgaagattct
ttgcccataaaaatgcgtggaagagtcggaataaagcgggaggaccgatctcctacaaag
gatgcgattcgtcacacattcagctcccaggaacacagcaccaaagttgtcagcagtaaa
cccagggtttccatcttggataaatacaagttcaagtccaagagccagcctacactcgac
cacttcagaggagccctggatctccagcccaagagacgtaaacttgtcagagcctcagct
ttggaagacgattctgcctcttcttcagccacaggctcaccaatgtctgctccaaactcg
ctagctgcgtcgtttgcctatcagtcagacagcgtacccaaaatgaaaaagacaatacta
gcagacaatgacgatgatttgagcgatatgattgtagcagacgatgacttggagcgttta
gaagaaaagatcaaacagaacatcaaagccaagcgagctcagaagaacgaaatcgtcact
gtcagtgacgacgaacttgaagaagatgatatcagtgacgacatgtcagaagaagacgac
gaaaacaactaccaaactggtattacttctattgataaccagatcttggagttcttgaat
gatgcacctgtggacgatttgattgaaatctgtactctcgagccggaagttgcaaagttc
gtcatcctgcaaagaccattcaacacgatatacgatgtttctgaaaataattttgaacca
gaagacgaagctaaggctaagaacagcagcagaagaagaaagactctaggcttgagaatc
atagaaagcaccgagttttccttaaagggctacaaggctgtagattcgctcatcaaaacc
tgttccaagtacggtacttcaatctctaaccaaattaatacttggggtgttactactacc
ggacagggtgagttatctgttactgatatagaccctgctgatgatgaggtgaaggaaatt
atagatttagacgaagagaacgatgacgacgaagaagaggtagttgtgacccattacaag
aagaagggattgagatacatcaagcacaagccagcattgttggccgacgaaattacgttg
aacaattaccaacaagtgggcatcaattggctcaatttattataccaaaacaggttgtct
tgtatattggcagatgagatgggtttgggtaaaacatgccaggttattgcctttatggct
catttaaagcagaccgaagaaaagaagggtcctcatttggttgtcgttccagcttctacg
cttgagaactggttaagagaattcaataagttctgtcccgacttgaaggtacaagcttac
tatggtacagtcaaggaacgtgaagatttaagatacgaacttagagaaatcgactttgac
gtcttggtgactacatatacgttagcagccggttctccgttggatttcaaattcttgagg
agtcagaatttcaacatcattgtatacgatgaaggtcacttcttgaagaattcaggaact
gaaaggtacaacagattgatgaaattgcaagccaagttcagattgttattgactggtaca
cccttgcagaataacttgaaggagttggtctccttgttgtctttcatgttgccaaaattg
ttcaacgaaaagaaagaagacttacaaggtttgttcaaccagaagatgggtaaagttact
tcgtcatcaaagtcagacaactacaatcccttactctcgattcaagccatcagaaaggca
aagacaatgatgactccgtttgtcttaagacgtagaaaggaccaggttcttcaacacttg
ccagccaagtgccatgagatagtgaagtgtgacttgtccaaggaccaaagaagtatttac
gatgaactttacaataaagctaagtccaccagatcagaaagggagagaagaaaacttctt
agttccaaggagcaggtagaattaaacaagaagcaaccgattgagtcttcttccaacgta
ttgatggcattaagaaaggcttctttgcatcctcttttgttcagaatccagtatactgac
gagaaactagccaaaatggccaaggctatcatgaatgagccagaatacgtggaagccaat
caaacatatatcttcgaggatatgcaagtcatgtcagactatgaactcaacaatctttgt
gctaaattccctaagactatgtccccctataaattgaacgaagacgcctttctcaatagt
ggaaaagtattggaattgcaaaagacattgaagctaatcatcgagggccggcaagaaaag
gtcttaattttctctttattcacccaggtgttggacatattggaaagagtcttgactcag
ttcaaatacaagttcgttagattggacggagccacttctgtcgaatcaagacaggatatt
attgacgaattctatgacgatgaaacaattccaattttccttttatctaccaaggccggt
ggatttgggattaacttgatcgccgccaacaatgtcattattttcgatcagtcattcaac
cctcacgatgacaagcaagccgaggatcgttgccatagagtgggccaaaagaaggaggtc
acagtgtacaagctcattgtcaacgatacagtcgaggaaaatatgttgaagttggccgag
aacaagttgcagcttgaccaaaccattagtgccgaaggggccgaagaggctaagttcgag
gagaaggcagcctctttgtttgaaaagttgctctttgaatag
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