Scheffersomyces stipitis: PICST_66961
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Entry
PICST_66961 CDS
T01023
Symbol
LSC2
Name
(RefSeq) succinate--CoA ligase (GDP-forming) beta chain (LSC2)
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00020
Citrate cycle (TCA cycle)
pic00640
Propanoate metabolism
pic01100
Metabolic pathways
pic01110
Biosynthesis of secondary metabolites
pic01200
Carbon metabolism
Module
pic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PICST_66961 (LSC2)
00640 Propanoate metabolism
PICST_66961 (LSC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_66961 (LSC2)
Enzymes [BR:
pic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
PICST_66961 (LSC2)
6.2.1.5 succinate---CoA ligase (ADP-forming)
PICST_66961 (LSC2)
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PICST_66961 (LSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
VID27_N
Ligase_CoA_2
Motif
Other DBs
NCBI-GeneID:
4837616
NCBI-ProteinID:
XP_001382488
JGI:
66961
UniProt:
A3LP98
LinkDB
All DBs
Position
2:1388963..1391032
Genome browser
AA seq
414 aa
AA seq
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MLSRTIARASRAVAQQKRFLSLHEYRSAALLEQYGVGVPKGYAATTAEGAFDAAKKLGTT
ELVIKAQALTGGRGKGHFDSGLQGGVKLISSPEEAKDLAAQMLGHKLITKQTGAAGKEVT
AVYIVERRDALTEAYVAILNDRAAQTPIIVASSQGGMDIEGVAAETPEAIHTFKVDLKEG
VTDKLATEVASVLGYTDAAIPEAAKAVQNLYKVFEEKDCTQVEINPLSETPDHKVLAMDA
KLGFDDNASFRQEEVFNWRDPTQEDPEEVEASKYGLNFIKLDGNIANIVNGAGLAMATMD
IIKLYGGKPANFLDCGGTATPATIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIA
ATKNFNLDIPVVVRLQGTNMQQAKELIDNSGLKLFAFEDLDPAAEKIVELAPAN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctagaaccattgcccgtgcctccagagctgttgctcaacagaaaagattcttg
tctttgcacgaataccgttccgctgccttgcttgagcaatacggcgtcggtgttcctaaa
ggttacgccgctaccacggctgaaggcgcctttgacgctgctaagaagctcggaaccact
gagttggtcatcaaggcccaagccttgaccggtggccgtggtaagggtcacttcgactct
ggtttacaaggaggtgtcaaattgatttcgtctccagaagaagccaaggacttggctgct
cagatgttgggccacaagttgatcacaaagcagaccggagctgccggaaaagaagtcact
gccgtatacattgtagaaagaagagatgccttgactgaagcttacgtagccatcttgaac
gacagagccgcccagactccaatcattgtcgcttcttcccagggtggtatggacatcgaa
ggtgttgctgccgagaccccagaagccatccacactttcaaggttgacttgaaggaaggt
gtcactgacaaattagctacagaagtagcttccgtattgggctacaccgacgctgccatc
ccagaagcagccaaggctgtccagaacttgtacaaggtgtttgaagaaaaggactgcacc
caagttgaaatcaaccctttgtctgaaactccagaccacaaggtattggccatggacgcc
aagttgggctttgatgacaatgcttcgttccgtcaagaagaagtattcaactggagagac
ccaacccaggaagaccctgaagaagtcgaagcttccaagtacggcttgaacttcatcaag
ttggacggtaacatcgccaacatcgtcaacggtgccggtttggccatggccactatggac
atcatcaagttgtacggaggtaagcctgccaacttcttggactgtggtggtactgccacc
cctgccactatcgagaaggctttcgaattgatcttgtctgacaagaaggtcaacggtatc
tttgtcaacatcttcggtggtatcgtcagatgtgactacgttgccgaaggtttgattgct
gccaccaagaacttcaacttggacattccagttgtcgtcagattacagggtaccaacatg
caacaggccaaggagttgattgataactcgggcttgaagttgtttgcctttgaagacttg
gaccctgccgccgaaaagatcgtcgaattggctccagccaactag
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