KEGG   Scheffersomyces stipitis: PICST_83690
Entry
PICST_83690       CDS       T01023                                 
Symbol
SNF2
Name
(RefSeq) component of SWI/SNF global transcription activator complex
  KO
K11786  ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_83690 (SNF2)
   03036 Chromosome and associated proteins [BR:pic03036]
    PICST_83690 (SNF2)
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SWI/SNF complex
     PICST_83690 (SNF2)
    RSC complex
     PICST_83690 (SNF2)
Chromosome and associated proteins [BR:pic03036]
 Eukaryotic type
  Chromatin remodeling factors
   RSC complex
    PICST_83690 (SNF2)
   SWI/SNF complex
    PICST_83690 (SNF2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Bromodomain SnAC HSA ResIII DEAD
Other DBs
NCBI-GeneID: 4838915
NCBI-ProteinID: XP_001384421
JGI: 83690
UniProt: A3LTF0
LinkDB
Position
4:complement(653510..658492)
AA seq 1566 aa
MNRQLTREDIHRIVDRWKQLKAQFGDQAINVPEFAQLNKIVKYFNQQQQMLQQNPNLRQQ
QQQQQQQQQQQQQQQQQQQQQQLQNQNQQNPALNPQSSSQLNNQQIPQSLPQQQHQGIHP
QGTPSHQQQQFPQSQSLNQMQFNNNNNTSNVSGTGSGSQGSSSESAFTTQQFQLVKSQFQ
ALKYLLNKPGANNPPIPQNLISFVTNDRSAVPSGGYLPARPGFQQPSNDGLLNQNVIGMQ
QGNLNKGMIPGQNVNQNLSIKNNTDVNNLNNLNNSKPPIKMEASKQKVSVPIQQIPPQSQ
QLQQPVSKPIKPEGLSDSGRLTDSLLKSKPYIRQPQPPVPLSKLVPDKTSDSKNIIIPIN
KPNVQVDSFELPEIFGDSVKDIEYGEIYSPQSRRQIPGLMPDGINSQEIFNNKEAFIVMQ
IELEMDSLRKKLDTIQDNDKERQRIEAELASLEMIPFQKELRGKLLSQVWFSKSLLPNSH
PNFLAKFNTLSLENVATAHDLYRHQLETLLQVQNQKHQSTINEILSYRENKDVTLARRRD
RLNRFATKISSFHNQTAKEEQKRIEKMAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLK
QTNQFLDSLAQAVQNQQRETSERFAIRDGTSVETNDEDKREKVDYYHVAHRIKEEVTKQP
SILVGGTLKEYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLITYLVEVKKINGPF
LVIVPLSTLTNWNLEFDKWAPSVKKITYKGTPNQRKVMQQDIRQGNFQILLTTFEYIIKD
KALLSRIRWVHMIIDEGHRMKNANSKLSETLTHSYHSDYRLILTGTPLQNNLPELWALLN
FVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDV
EKDLPNKVEKVVKCKMSSIQSKLYQLMLKYNILYASDPNGPSDVPLIIKNANNQIMQLRK
ICNHPFVYEEVENLINPTIETSDIIWRVGGKFELLDKILPKFKTTGHRVLIFFQMTQIMD
IMEDFLRLRGMKYMRLDGGTKADDRTALLKLFNAPDSDYFCFLLSTRAGGLGLNLQTADT
VVIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQ
AGKFDNKSTSEEQEAMLRALIEKEEERRQHGNDEEEEDLNDDELNQIIARNDLELVTFRR
LDEERAQATKEAKYPTRLFSDQELPEIYQKDPEELIRKDEVILEDYGRGTRERKTATYDD
HLTEEQWLRQIDGVVSEDSDDEVKAKPSKLKRGRPRGRPRSKGPEPSDSKEGTPDVIQTD
TESVTSVKRALTDEAIASAKRQKSATPKPAPASRSKKAAARNRGARSKISLLNRSTPSVD
PLTPDERAQLQNVLETIYGLVINYKNSHDRRLSDLFMVKPSRKLYPDYYVLIKNPIALDI
VKKRVFSKTYSQIREMLEDIHLMFSNARIYNEEGSIVYQDATALEQLAIDKFKEMSGDLS
AEEIEKILDFREFDETFNLKPLVVPAAIKQPVETKLEQLDNDEPIDSPLVGISTNGGTEL
STPVNP
NT seq 4701 nt   +upstreamnt  +downstreamnt
atgaaccgccagttgacacgtgaggacatccaccgtatcgtcgacagatggaaacaattg
aaggcccagtttggcgaccaggccatcaatgttcctgaatttgctcagttgaacaagata
gtgaaatatttcaaccagcaacagcagatgctccagcaaaatccgaacttgagacaacaa
cagcagcaacagcagcaacagcagcaacagcagcaacaacagcaacaacaacaacaacag
cagcagctccagaaccagaaccaacaaaatccagcccttaacccacaaagctcgagccaa
ctcaataaccaacaaattccacaactgcttccacagcaacaacaccagggtatccatcca
cagggaacacctctgcaccaacagcaacaatttcctcagtcgcaatcacttaaccagatg
cagtttaacaacaataacaatactagcaatgtatctgggaccggttctggttcccaggga
agttcgagtgaatctgcatttaccactcaacagtttcaacttgtaaagtcgcagtttcag
gctctcaagtatcttttgaacaagcctggagccaacaatccccctattccgcagaatttg
atctcgtttgttactaacgacagatctgctgttcctagcggtggatatcttcctgcaaga
cctggatttcagcagccttctaacgatggactcttaaaccagaatgtgatcggaatgcag
cagggcaatctcaacaagggaatgattccgggccaaaatgtaaaccagaacttgtcaatt
aagaataacaccgatgttaataatttgaacaatcttaataatagtaaaccgcctatcaag
atggaggcatcgaaacagaaagtatcagtaccgatacaacagattcctccacaatcccaa
caacttcaacaaccagttctgaaacctataaagcctgaaggtttgtccgattctggtaga
ttgactgattcccttttgaagctgaagccttacattcgtcaaccacaacctcctgttcct
ctcagtaaacttgttcctgataagactagcgatagcaagaacattatcattcccataaac
aagccaaatgtacaagtggacagttttgaacttccagagatatttggagattctgtgaaa
gacattgagtatggtgagatctactctccacagagtcgtcgtcaaattccgggattgatg
cctgatggaatcaattcccaggaaatctttaacaacaaagaagcatttattgtgatgcaa
attgagcttgaaatggactcattgagaaagaaactcgatactattcaagacaatgataaa
gagcgccagagaattgaggcggaattggctctgttagagatgattcctttccaaaaggag
ttgcgcgggaagttgttgtcacaagtctggttcagcaagtcgttgttgcccaattctcat
cccaacttcctagcaaagttcaacaccttatctcttgaaaatgttgctacagctcacgat
ctctatagacaccaattggaaactttacttcaagtgcagaaccagaagcatcagagcact
atcaatgagatcttgctgtacagagaaaataaggatgtaactcttgcgagaagaagagat
cgcctcaacaggtttgccaccaagatcagcagtttccacaatcagacagccaaggaagaa
cagaagagaatagaaaagatggccaaacaacgtttgcaagctttgaagctgaacgatgag
gaagcctatttgaaattgttagaccacacaaaagatactagaattacgcatcttttgaaa
cagaccaaccagttcttggattcgttggctcaagctgtccagaaccagcagagggagacc
agtgaaagatttgccataagagacggaactctggtggagactaatgatgaagacaaaaga
gaaaaggtagactactaccatgtggctcatcggatcaaggaagaagtcactaaacaacct
tctatcttggtaggaggtactttgaaggagtatcagattaagggtttacagtggatggtt
tcgttattcaataaccatttgaacggtatcttggctgatgaaatgggattgggtaagact
attcaaactatttctttgattacatacttggtggaagttaagaagatcaatggaccattt
ttagtgattgtacccttatcaacgttgaccaattggaacttagaattcgataaatgggcc
ccatcagtgaagaaaatcacttataaaggtacacctaaccaacgtaaggttatgcaacag
gatatcagacagggtaatttccaaatcttgttaactactttcgagtacattatcaaggat
aaggcgctattgtcgagaatcaggtgggtacacatgattattgatgaaggacatcgtatg
aagaatgccaactccaaactttctgagacattgacccatagctatcacagtgactaccgt
ttgattttgacaggtactcccttacaaaataacttacctgagttgtgggctcttttgaat
ttcgttttgcccaagatattcaactcagtaaagtcgtttgacgaatggttcaacactcct
tttgccaacactggtggacaggacaagatcgaattaagtgaagaagaaactttattggtt
atcagaagattgcacaaggtgttgagacctttccttttgagaagattaaagaaggatgta
gaaaaggacttacccaataaggtcgagaaagtggtcaaatgtaagatgtcatctatacaa
tcgaagttgtatcagcttatgttgaaatacaacatcttgtatgctagtgaccctaatggc
cccagtgatgttccgttaatcatcaagaatgctaacaatcagattatgcaattgcgtaag
atttgtaaccatccatttgtttatgaggaagtggagaatttgatcaatcctactattgaa
acaagtgatatcatttggagagttggtggaaagtttgagttgttggacaagattttgccc
aagttcaagaccactggccatagagtgttgattttcttccagatgacccagatcatggat
atcatggaagatttcttgagattgcgtggaatgaaatatatgagattggatggtggaacc
aaagccgacgatagaactgctttgttgaagttattcaatgccccagattccgactatttc
tgtttcttgttgtctaccagagctggtggtttaggtcttaacttgcagacagcagatact
gttgtcattttcgacactgattggaacccgcatcaagatttgcaagctcaagacagagct
catagaattggacagaaaaacgaagtgagaattttgagattgattaccgaagattctgtc
gaagaaatgattttggaaagagctcatgctaagttagaaattgatggtaaggtcatccag
gctggtaagtttgataacaagtctacttccgaagaacaagaggctatgttgagagccttg
atcgaaaaggaggaagaacgtagacagcatggaaatgacgaggaagaagaagacttgaac
gatgacgagctcaatcagattatcgccagaaatgaccttgagttggtgacgttcagaaga
ttggacgaagaaagagcacaagctaccaaagaagcgaaatacccaacgagattgttttct
gaccaggaattgcctgagatttaccagaaggatcccgaagagttgatcaggaaggatgaa
gtgattctagaagattatggaagaggtacaagagaacgaaagacggctacctatgatgat
catttgactgaagagcaatggttgagacaaattgatggtgttgtttctgaagacagtgat
gatgaggtaaaagccaagccttcgaagttgaagagaggaagacctcgtggaagacccaga
tcaaagggccctgaaccttctgatagcaaagaaggcactcccgatgtaatccagacagat
actgagtctgttacttctgtgaaaagagctttgactgatgaagctatagcttctgccaaa
cgtcaaaagtccgccacccctaagccagcacccgccagtcgctccaagaaggcagcagct
cgtaacagaggtgcccgtagtaagatatcactcttgaatcgttcaactccatcagtggat
ccattgactcctgatgaaagagcacaattgcagaatgttcttgagacaatctatggttta
gttatcaactacaagaactctcatgacagaagattgagtgacttgttcatggtgaagcca
tcgagaaagctctatccagactattatgtcttgatcaaaaatccaattgctttagacatt
gtaaagaagagagtgttttccaagacttatagccaaatcagagagatgttagaagatata
catttgatgtttagcaacgccagaatctacaatgaggaaggttctattgtgtatcaagat
gccacagctctcgagcaattggccattgataagttcaaggagatgtcaggtgatttgagc
gctgaagaaattgaaaagattcttgactttagagaatttgacgagaccttcaacttgaaa
cctttggtagttccagctgccataaaacaaccagtagaaaccaaactcgagcaactagac
aacgacgagcctattgacagtcccctagttggaatctccaccaatggtggaaccgagttg
tctacgcccgtaaacccttag

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