Phytophthora infestans: PITG_03751
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Entry
PITG_03751 CDS
T01333
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pif03036
]
PITG_03751
Chromosome and associated proteins [BR:
pif03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
PITG_03751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
9467692
NCBI-ProteinID:
XP_002906797
UniProt:
D0MYF0
LinkDB
All DBs
AA seq
1640 aa
AA seq
DB search
MIVIYPFYSYIFTKLSSVEQAWFSLVLLIIKLAIKNGISYYIRSNTDMQPEIVVFNVDVF
NALFVSFSMQNSTSQLTVIVIITVDFIRMAGSIREVVHLVRELKRMEDHINVLKAVLKGN
VQPLQNSRNALAPIAQKSLESRAPESSHRTSNRWKSSSGANAQSNLVFMERLYARKVLNL
LHLTEFTILVEYIEVVVPVVYLLHHNELDRTLWGPASTTGRSRATDIVIFIQLAVVALLG
VTCALDYDKPEAARLAAAGATLLMYFRSIGLLRILLAIFQSETLRPGQRKKRPMPSRMHA
VPNKMRQKFLLPLYVDPEDAVAADAPESLYTVSPNPVALDESFNPQRLATLIRSTTTNSF
GSLGEPTETSAEVLNSLPKWAQAVVQTGCFNAAGTMSSPGGKLKRGSGLQSEPSNGRPRK
RRSFGHGVDHESLAGDESSELQAGLDELNIELEKDPDLEDDEELPIVFTQAEATADNFEK
FAELLERLVETATNSQQAFDVESNDADVFQSEEVKMLRQSLKALEKNDWIKKLEPELLIL
LMSSFDAQRVSTLVVSLIQSCAAAGKLETTEPEIDVLQDLNVESSTPDTVADEKSMYRDN
VVRAASEDTRNSARSFARVLLNACWKKSEERDNRVVLDNFVEDLLVMFVRPEWPGAEDLL
EVLSSSLASILRANISADIKNPDSHHSLAALNLVGKICASIKQYQRKVAHSTVKDDSGSI
AVIEEHTSNLREVLDIKKTSSRKEDTNVSNELLDQITLKHIVVMHLQRHNFGQGDSKKLF
LLKFISESKSHWGEAKAAFVEREKKLWESLWEVPKGGVNSTFKVAPPTIELALTSSLHLA
MKRGFCGLFNKLLAHIMALLSKGIPSLRARVMKCLRGIVDVDPMLMAENGVQLAVERCCS
DEKSSVREAAVNLIGTYVLLQPVLFDSYFDVLAERLRDKGIKVRKSVCKIFKIAISMQDQ
SQEKITEKALHRKSACMRCLVERIGHAAEDQAVKNFIIDTFQEVWFGTDLTSSRLSNPLS
VFCDDNTLPPGWTTVVHEKNGSASEEIAKFVFEDGSVANSVEEAWSAYRTPTVTPASVVK
SNDSKLDNSSEVVATIVEVIHGVPNLGWFTELLKRLLGKRDRKTGTQSSKNRSYQVAIAE
DRAEAIVDRLVGCLMDLQEGTFLKGVSIETAHEKDVKVQSLSVSMINNILSVKRVPHTIA
TKLEVCTLHTECLVSMKELLLSEIIRAEIGEATRTTNQSKTKVQQVQGDQEADASLIGNV
MQAELVHILALSLQRVPQIRKEAIACIGALLTPGLVNPLQCIPNLVTLETDRVSDVRDAA
FSLLLALEKYRSQFHAPLLKGIQDSYLFQLRVYGDATALGIDENKKAYCLFGRLYMNCVK
STKAQGTLFLRALVNQFTDQGTVLQPLKNKPFTSHSKTFTTSLKYLCYLAQILSTLPYEV
EDEPLYIIYSINRYVSLRLGPVLDDLMEAFVEAGVPQNLLEDDEADLSNVKIDEYRLRPV
ADSQALQTNGCIAFAMALMLRLKFMLKRNYQLDDEKCATYKPSSTDASEEAKERSSKKLL
LPSVDDLCQPDEAIQVNWNLFLVAWSAAREDQKQLDIDMEQVQKPKATPKRRRRPRKSIS
SKRQKQQENDSEDEDVELLA
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgatctacccgttctacagctacattttcacaaagctatcgtcagttgaacag
gcttggttttctctggtcttgttgatcatcaaactggcaatcaagaatggaattagctat
tatatccgttccaacaccgacatgcagcctgaaatcgtggttttcaacgtcgacgtattc
aacgcactcttcgtttctttctcaatgcaaaattcaacctcacagctcacggtcatcgtc
ataataactgtagactttattcgaatggcgggttcgattcgtgaagtggtgcatcttgta
cgcgaactcaagagaatggaggatcacatcaatgttctaaaagctgttcttaaaggaaat
gtgcaaccgctacagaattcgaggaatgcgctggctccgatagcgcaaaagtcactggag
tctcgagctcctgagtcttcccacagaacaagcaaccggtggaaatcttcgtccggtgca
aacgcacaaagcaacttggtcttcatggagaggttgtacgcgaggaaagtactgaacctg
ttgcatctcacggaatttacgattcttgtcgagtatatcgaggtggtggttccagttgtc
tacttgctgcaccacaatgagttagatcgcactctctgggggccggcatcaactaccggt
cgctcgcgggctacggacatcgtgatcttcatccaactggctgtagtggcgctgctcggg
gtgacttgcgctctggattatgacaaaccggaggcagcgcgattggcagcagcaggggca
acgctgttgatgtacttccgcagcattggactgcttcgcatcttgcttgcaatcttccag
tcggagactctcaggcctggacagcgaaagaagcgtcccatgccgagcagaatgcatgca
gtgccgaacaaaatgcgtcagaagttccttctcccgctgtacgtggatccggaagacgcc
gtggcagcggatgcacccgagtcactgtatactgtaagccccaatccagtggcacttgat
gagtccttcaacccacagcggttggcgacgctcattcgctccacaaccaccaacagcttc
ggctcgttaggtgagccgacggagacatctgccgaagtgttgaactctctgcctaagtgg
gcacaggcggttgtgcagacaggatgcttcaacgctgctgggacgatgtcatcacctggc
ggcaagttgaagcgaggttctggtttgcaaagtgaaccgagcaacggaagaccacgtaaa
agacggtcttttggtcatggcgttgatcacgaaagcctggcaggcgatgaatccagtgag
ctacaggctggtttggatgagttgaatatcgagttggaaaaggacccggatctggaagac
gatgaagaacttccaatcgtattcacacaagcagaagccactgcagataactttgagaag
tttgctgagctgctggagagactggtggaaacggcgaccaattcacagcaagcgtttgat
gttgagtcgaatgatgcggatgtgtttcagtccgaggaagtgaaaatgctgcggcagtca
ctgaaagccctggaaaagaatgactggattaagaagctggaaccagaattgctgatcttg
ctaatgagctcattcgatgcgcagcgtgtatcaacgctagtggtgtcgcttattcagtct
tgcgctgctgctgggaaacttgaaacgacggaaccagagattgacgtgctgcaagactta
aatgtagaatcatcaacgccggatacagtcgctgacgaaaaatccatgtacagggataac
gtggttagagcagcatcggaagatacacgaaacagtgcgagatcattcgctcgggtgctg
ctaaacgcatgctggaagaaatctgaagagcgtgataatcgcgtggtgctagacaacttt
gttgaagatctcctcgtaatgtttgttcgcccagagtggccaggtgcagaagacttactg
gaggtgttgagctcctcgctggcaagtatcctacgcgcaaatatctccgcagatatcaag
aatccggattctcatcacagcttggcagcgctcaacctagttggaaagatatgcgcttcc
attaaacaataccagcgaaaggtggcgcatagtaccgtgaaggatgacagtggctctatt
gctgtcattgaagagcatacaagcaatttgcgtgaggttctcgatatcaagaaaactagc
tccagaaaagaagatacaaacgttagcaacgagttgctggaccagataacgctgaagcac
attgtggtgatgcaccttcaacggcacaacttcggtcagggtgattcgaagaagctgttt
ctcttgaaattcatctcggaatcaaagagtcattggggcgaagccaaagcagcttttgtg
gaacgcgaaaagaagttgtgggagtcattatgggaagttccaaagggaggggtgaactcg
acgtttaaggtggctcccccgacgatcgagttagccctgacttccagcttacatcttgct
atgaaacgaggattctgtggtctattcaacaagttactagctcacattatggcattgctc
tcaaagggaataccaagtcttagagcacgagttatgaaatgtctgagaggaattgtcgac
gtcgaccccatgcttatggccgaaaatggggtgcaattagccgtcgaacgttgttgctct
gatgaaaaatcttcggttcgcgaagcagctgtcaatttgatcgggacctacgtcctgtta
cagcccgtcttgttcgacagttactttgacgttcttgctgaacgactacgtgacaagggc
atcaaagttcggaaaagcgtgtgcaagattttcaaaatagcgatttctatgcaagaccag
tctcaagagaagattacggaaaaagcgcttcaccgcaagagtgcttgcatgcgatgtctg
gtcgaacgaattgggcatgcggctgaagatcaagctgtcaagaatttcatcattgatacg
tttcaagaagtctggtttggcaccgatcttacttcttccagactctcaaatccactgagt
gtattctgcgacgacaacactctaccacctggctggactaccgtagttcatgagaagaat
ggttccgcgtcagaggaaatcgctaagtttgtttttgaagatggaagcgtcgccaattca
gtggaagaagcgtggtctgcgtatcgaactcctaccgtgactccagccagtgtagtaaag
tcgaacgactccaagctggacaacagctctgaagttgttgcaaccattgttgaggtcatt
catggtgtgccaaacctaggatggttcactgaactactgaaaagactgttgggaaaacgc
gatcggaaaaccgggacacagtcgtctaagaatcggtcttatcaagttgcaatcgctgaa
gatcgagcagaggcgattgttgatcgcttggtggggtgcctaatggacttacaggaaggc
acatttctcaaaggcgtttcgatagagacagcgcacgagaaggacgtcaaggtccaaagc
ttatccgtgtcgatgatcaacaacatcttgagcgtcaagcgagtgccacatactatcgct
acgaaactggaagtttgtactctgcatacagaatgtctcgtcagcatgaaggagttgctg
ctttccgaaattattcgagcggaaataggtgaggcaactcggacgacgaaccagtcaaag
accaaggtgcagcaagttcagggtgaccaagaagctgatgcctctttaatcggcaacgtc
atgcaggcagagctggttcacattttggcattgtcactgcagagggtgccacaaattcgc
aaagaagccatcgcatgcattggtgcactgctaacgcccggcttagtgaatccgttgcaa
tgcattccgaacttggtgacgctcgagactgatcgcgtttcggatgttcgtgatgcagca
ttttctctgttgttggcgcttgaaaagtaccggagccaatttcacgcaccgttgcttaaa
ggcattcaagactcgtatttgttccagcttcgtgtgtatggcgatgccacagcgctggga
atcgacgagaacaagaaagcttactgcctctttggacgactgtatatgaattgcgtcaag
tcgacaaaagcgcaaggaacgctttttcttcgggcactggtaaaccagttcaccgaccaa
gggactgtgcttcagccattgaaaaacaagccgtttacctcccacagcaagaccttcacg
accagcttgaagtatctgtgctatctggcgcaaattctgtcaacgcttccttacgaagtg
gaggacgagccgctgtacattatttattcgatcaaccgctacgtcagccttcgactcggc
cccgtgctggatgatctcatggaagccttcgtcgaagccggcgtaccacaaaatctactt
gaggatgatgaagcggacctttcgaatgtaaagatcgacgagtatcgattgcgcccagta
gctgactcgcaggcgttgcagacgaacggctgtattgctttcgcgatggcactgatgctc
cgtctgaaatttatgctcaagcggaactaccaactcgacgatgaaaagtgcgcaacatac
aagccatcgtccactgatgcttcagaagaggcgaaggagcggtcttccaagaagcttttg
ctgccttcggttgatgatttgtgccaacccgacgaagctattcaagtgaactggaacctg
ttcttagttgcgtggagtgccgctcgagaggaccagaagcagttggatatcgacatggaa
caagtccaaaagcccaaggctacaccaaagcgccgacgccgaccgcgcaaatccatcagc
tctaagagacagaagcaacaggagaacgatagcgaggacgaggacgtcgaacttctggct
taa
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