Phytophthora infestans: PITG_18509
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Entry
PITG_18509 CDS
T01333
Name
(RefSeq) exosome complex exonuclease RRP44, putative
Organism
pif
Phytophthora infestans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_S1
Rrp44_CSD1
CSD2
TFB6
Motif
Other DBs
NCBI-GeneID:
9462748
NCBI-ProteinID:
XP_002997626
UniProt:
D0NYF6
LinkDB
All DBs
AA seq
1079 aa
AA seq
DB search
MADVETPLLWCVDELNVATRRGRVVRKVRERYLRDDLSCSLPHCSLCSADDDASAATHVL
GTTKTLLADNPRDGVYLLPSMKTVLLQMDALDFSAKHKKKTKKDTTEREVFADVLVLETV
WEFVKRQDLGVYNRLRALLMNADRRFVVFANEHHRSCFVQKKQMLPRGYKEDTSEDTLVE
TEEERNERAVATAWKWYAGHLAELERQDVKVQFLANDVEDLKQAEKFGVCGGKTIAEFLK
PVADKYPELLDLLSASAAEEKALTAEGVSTTKGRGKKKLYPEHLPAAEILAGIKNKRFFK
GTIRCNRDHWLECHVLIHGANCVKIPVLLQGREHINRAIDGDLVAIQLLPKDQWKKPSDS
FAANGTAAAEAAEEDEDNEDAQPEPVGVAEPTVSLEQVALVQSDASQHAKPAGRVVGIIQ
RNWRKFCCSLEAPRDGVTLNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWP
AYSKFPLGHYVRTLGVIGDKETETTVLLLEHDIPCDQFSDEVMRCLPAEDWKITPENASG
RRDLRDLPVCSIDPPNCKDIDDALHAKLLPNGNLQVGVHIADVTHFVAPGSALDEEAADR
GTSTYLVDRRLDMLPGLLTTKLCSLTDVEDHFAFSVLWELQLVGQSDVQVVDVQFCKSLI
RSVASLSYQQAQEFLDDPEAGGVYGQDSTLKKKKKGESDEQFERRQLLGSGIKTLNTIAT
RLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKI
VRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAADKEAAGSKRK
HGDKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADV
VVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPT
RTDAVITKVKNNGVGVLLPRFGIEGMIFLCGKDEQDDQDVVKFDGARHTLTLVQKSRKLQ
VFDRVRVKVYVALTFGNRQELKMDLLDEDDDEDDNQEDAAQKEAEANLRAARKKRKVAT
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagacacctcttctctggtgtgtagacgagctgaatgtggccacgcgt
cgcggtcgcgtagtgcgcaaagtgcgcgagcgctacctgcgcgacgacttgagctgctcg
ctgcctcattgctcgctgtgtagcgccgacgacgatgcatcagcggccactcacgttcta
ggcacgaccaagacgcttctggccgacaatccacgcgatggagtgtatctattgccatcc
atgaagacagtgctgctgcagatggatgctctggatttcagtgctaagcataagaagaaa
acaaagaaagacactacagaacgagaagtctttgcggacgttctagtgttagagacggtc
tgggagttcgtcaagcgccaagacctgggcgtctacaaccgtctacgcgctctactaatg
aacgcagacagacgcttcgtggtcttcgctaacgagcaccatagatcgtgttttgtccag
aagaagcagatgttgccaagaggctacaaggaggacacttcggaggacactcttgtagag
acggaagaggaacgtaatgaacgcgctgtagccactgcctggaaatggtacgccggccac
ttagccgagcttgagcggcaggatgtcaaggtccaatttttagccaatgacgttgaagat
ctcaagcaggctgagaagtttggtgtttgtggaggcaaaaccatcgcagagttcttgaaa
cctgtagctgataaatacccagagcttctggatctattgtctgcttcagctgcggaggag
aaggcgctgactgcagagggtgtgagtacaaccaaaggacgaggcaagaagaagctgtac
ccggagcatttaccggctgctgagatactggcggggattaagaacaagcgcttctttaag
ggaacaatccgatgcaacagagaccactggctcgagtgtcacgtgttgattcacggcgct
aactgcgtcaagatcccggttttgctacagggacgagagcatattaaccgtgcgattgat
ggggacttggtggcgattcaactgctaccgaaagaccaatggaagaagccgtcggactcg
tttgctgccaatggaacggcggctgcggaagctgctgaggaggacgaggataacgaagat
gcccaaccggaacctgtgggcgtggcggagcctaccgtgtcattggaacaagtggcattg
gtgcagagtgatgcgtcgcagcacgccaagcctgctgggcgtgtcgtgggcattatccag
cgcaattggcgcaagttctgctgctctctggaggctcctcgtgatggtgtgacgctgaat
gcgtcgggtagctgcttggtggtgccggtggaccggaaggtgccgaagatcaagatccag
acgcggcaacaggaagcgttgatggacaagcgagtgctggtggcgattgactcgtggccg
gcatacagcaagttccctctgggccactacgtgcgtacactgggcgtgattggcgacaag
gagacggagacgactgtgctgcttctggagcacgacatcccgtgcgaccagttcagtgac
gaagtgatgcgctgtctgcctgctgaggactggaagattacacccgagaacgcctcagga
cgccgagatctacgtgacctgccagtgtgcagcatcgacccgcccaactgtaaggacatc
gacgacgctctgcatgccaagttattgcccaatgggaacctccaagtgggcgtccacatt
gccgacgtgacgcactttgtggctcctggcagcgcgctggacgaagaagcagcggaccgc
ggcacgtcgacgtatctggtggatcggcgtctcgacatgctgccaggtctgctgactacc
aagctctgttcgctgacggacgtggaagatcactttgccttcagtgtgctgtgggagctc
caactggtgggacagagcgacgtgcaggtcgttgacgtacagttctgcaagagtctgatc
cggtccgtggcgtctttgtcgtatcagcaagcgcaggagttcttggacgacccagaggct
ggtggcgtgtacggccaagactcgactttgaagaagaagaaaaagggcgagagtgacgaa
cagtttgagcgccgacagctgctgggaagcggcatcaagacgctgaacacgatcgcgacg
cggctacgcgccaagcgtatcgaggccggcgccttgacgctggcgtcccctgaagtgcgc
tttgtgctggacacggagacgcagaacccgctggacgtgcagatgtacacgctgcgagac
accaacgctctggtggaggagttcatgctgctggccaacattacagtggccaagaagatc
gtgcgtcacttcccgacgttctcgatgctgcgtcggcatccggcgccgtccaagcgccag
tttgacttgctctgcagtcaggccaaggctgtgggtgtggagctgcacgtggacacgtcc
aagcaactgcaagactcgctggatgcggccgacaaggaagctgctgggagcaagaggaaa
cacggcgacaaggcgaacccgtacttcaacaagctgctgcggatcatgacgacgcgctgt
atgatgccagcgagctacttcagctccggcgaggtggcgcctcccgagttccatcactac
ggtctggctgctcccatctacacgcacttcacgtcgcctatccgtcggtacgctgacgtg
gtggtgcatcgcctgctggctgccgctatcggcgtggctccactgcccagttacctcgag
aacaagtcgcatctgcacgagatcagcgaccaacttaaccgtcgacaccacgcggcgcaa
ctggcaggaagagcgtccgtgactctgcacacggtgctctacttccagcagtatcccacg
cgcacagacgccgtcatcaccaaggtcaagaacaacggagtgggcgtcctactgcctcgt
ttcggcattgaaggcatgatcttcctgtgtgggaaggacgagcaggacgaccaagatgtt
gtcaagttcgacggagctcgtcacacactcacgttggtgcagaagagtcgcaagctgcag
gtgttcgaccgtgtccgagtcaaggtgtacgtggcgctgacgttcggcaaccgccaggag
ctcaagatggacttgctggacgaagacgatgacgaagacgacaaccaagaggatgcggcc
cagaaggaagccgaagcgaacctccgtgctgctcgcaagaaacgcaaagtggctacataa
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