Pirellula sp. SH-Sr6A: VN12_08375
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Entry
VN12_08375 CDS
T04360
Symbol
frdB
Name
(GenBank) Fumarate reductase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00020
Citrate cycle (TCA cycle)
pir00190
Oxidative phosphorylation
pir00650
Butanoate metabolism
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01120
Microbial metabolism in diverse environments
pir01200
Carbon metabolism
Module
pir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VN12_08375 (frdB)
00650 Butanoate metabolism
VN12_08375 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
VN12_08375 (frdB)
Enzymes [BR:
pir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VN12_08375 (frdB)
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_9
Fer4_7
Fer4_17
Fer4_18
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
AMV32124
UniProt:
A0A142XZ50
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All DBs
Position
2000551..2001408
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AA seq
285 aa
AA seq
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MIASGTESSKRKPAKINVRVLRQDGPGLPQYWERHQVEYEPDMNVISVLQKIAAQSKTTD
GKKVTPVAWDCGCLEEVCGSCTMVINGRVRQSCSALVDRLLEDHPEEIELRPMTKFPVLR
DLMIDRSRLFHNLKRVKAWVPVDGYFDMGAGPRISREEQEQNYPLSQCMSCGCCLEACPQ
FTKIELQRNPGETDEAFEARKQMAYDEGFLGAHAISQAVLFNSHPVGKNIARERMEALTA
AGGVQACGNAQNCVAVCPKEIPLTTSIARAGRAATVYSFRKFFDR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcatcaggtactgaatcatccaagcgaaagcccgctaagatcaacgtccgtgtc
cttcgacaagacggtcccggcctcccgcaatactgggaacgccatcaagtcgaatacgaa
ccagacatgaacgtgatcagcgttctccaaaagatcgctgcgcaatccaaaacgacggac
ggcaagaaagtcacgccggttgcttgggactgcggatgcttggaagaggtctgtggatcc
tgcaccatggtgatcaacggccgcgtgcgacaaagctgtagcgccttggtcgatcggctc
ttagaagatcatccagaggaaatcgagctccgtcctatgacgaagttccctgtgctgcga
gatctgatgatcgaccgatcccgactcttccataacttgaagcgagtcaaggcgtgggtg
ccggtcgatggctactttgatatgggtgccggtccacgaatttctcgtgaagagcaggaa
caaaactacccgctcagccagtgcatgagttgcggttgctgcctggaggcttgcccccaa
ttcaccaagatcgagttgcaacgaaatcctggtgaaaccgacgaggcattcgaggctcgc
aagcaaatggcctacgacgaaggattcttgggtgcccatgcgatttcccaagccgtgctc
ttcaattcccatcctgtcggaaagaacattgcccgcgagcgcatggaagcactcaccgca
gcagggggagtgcaagcctgtgggaatgcacagaactgtgtcgccgtttgtccaaaagag
attccgctcaccacttcgattgctcgtgcaggacgggccgcgacggtctacagcttccgc
aagttcttcgatcgataa
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