Paenibacillus sp. JDR-2: Pjdr2_5650
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Entry
Pjdr2_5650 CDS
T00977
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pjd03016
]
Pjdr2_5650
Enzymes [BR:
pjd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Pjdr2_5650
Transfer RNA biogenesis [BR:
pjd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pjdr2_5650
Prokaryotic type
Pjdr2_5650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ACT04257
LinkDB
All DBs
Position
complement(6485468..6486208)
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AA seq
246 aa
AA seq
DB search
MRNIAATVSYDGTDFNGFQSQPYGRTIQQEIELAIKKLTGEDIIILGSGRTDAGVHANGQ
VFNFLTESTIPAERWAIALNTRLPKDIVILEAHEVPEAFHSRRSAKRKTYRYTIDMGKFP
DVFYRRYAFHHPTPLNVEAMQKGLSFLVGEHDFTSFTSIHSTKPHHVRTIYEAYLEREGQ
MLHMYMTGNGFLYNMIRIVMGTLLHVGHGKLKPEDMARILEGRKRSLAGPTAMPHGLMLM
KVEYPE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatatagcagcgacggtaagctacgacgggacggactttaacgggtttcagtct
cagccgtacggacggaccatccagcaggaaatcgaactggcaatcaagaagctgaccggc
gaggatattattattctcggatcgggcagaacggacgccggcgtgcatgcaaatggacaa
gtgttcaactttctgacggaatccacgattccggcggagcgttgggctattgccctgaat
acgcgcctgccgaaggatattgttattctcgaagcgcatgaagtgccggaagcttttcac
tcccggcgctctgcgaagcggaagacgtatcgctacacgattgatatggggaagtttccg
gatgtgttctatcgccgctatgcgttccatcatcctacaccgcttaatgttgaggccatg
cagaagggacttagcttccttgtgggggaacatgacttcacttcatttacgtccatacac
tcgactaagccgcatcatgttcggactatctacgaggcttatcttgagcgtgaagggcaa
atgctccatatgtatatgacaggcaacgggtttctctataacatgatcagaatcgtgatg
ggcacgctgcttcatgtcggccacggcaagctcaagccggaagatatggcgcgcatattg
gaaggccgcaagcggtctcttgccggtccaacggcgatgcctcacggtctgatgctgatg
aaggtagaatatccggaataa
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