Pseudomonas knackmussii: PKB_2394
Help
Entry
PKB_2394 CDS
T03081
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00630
Glyoxylate and dicarboxylate metabolism
pkc00680
Methane metabolism
pkc01100
Metabolic pathways
pkc01120
Microbial metabolism in diverse environments
pkc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKB_2394
09102 Energy metabolism
00680 Methane metabolism
PKB_2394
Enzymes [BR:
pkc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PKB_2394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer2
Fer4_6
Fer4_15
Fer4_2
Fer4_16
Fer4_18
Fer4_4
Fer4_13
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
CDF83741
UniProt:
A0A024HFT2
LinkDB
All DBs
Position
complement(2498967..2501855)
Genome browser
AA seq
962 aa
AA seq
DB search
MINYFDPASSSASEIDLGTPARESDVQVSLSIDGREISVPAGTSVMRAAALLGTSIPKLC
ATDSLEAFGSCRMCLVEIDGMRGYPASCTTPVTEGMVVRTQTPKLASLRRNVMELYISDH
PLDCLTCPANGNCELQTVAGQVGLREVRYGYEGANHLSDEKDVSNPYFDYDPSKCIVCNR
CVRACEETQGTFALTIAGRGFESRVAAAGGENFLDSECVSCGACVQACPTATLMEKSVVE
IGQPERSVITTCAYCGVGCSFRAEMKGEQLVRMVPDKNGQANHGHSCVKGRFAWGYATHP
DRITKPMIRKHIDDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEETYLV
QKLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMKADVVLVIGANPTDA
HPVFGSQLKRRLREGAQLIVIDPRRIDLVDSPHARAELHLQLRPGTNVAMLNALAHVIVT
EGLVNQPFVDARCEAADFARWRDFVSLPENSPEALGPVCGVPPEEIRAAARLYATGGNAA
IYYGLGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELP
GYRHISNETVRHQFEQAWGVTLQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNTQ
HVTAALSAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPLG
GKADWEATVALANALGYRMDYKHPSEIMDEIARLTPTFTRVSYAELERHGSLQWPCNDAT
PDGTPTMHIEQFVRGKGRFMLTGYVPTEEKINSRYPLLLTTGRILSQYNVGAQTRRTDNV
AWHEEDRLEIHPEDAESRGIHDGDWVGVGSRAGQTVLRAKVSERVAPGVVYTTFHFPESG
ANVITTDNSDWATNCPEYKVTAVEVTRVYHPSEWQKRYQAFSDEQRRLLKERRHAEKAEV
RR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattacttcgatcctgccagttccagcgccagcgaaatcgacctcggcacccct
gcccgcgagagcgacgtgcaggtcagcctgagcatcgacggccgcgagatcagcgttccc
gccggcacctcggtgatgcgcgccgcggcgctgctgggcaccagcattcccaagctctgc
gccaccgacagcctggaagccttcggctcctgccgcatgtgcctggtggaaatcgacggc
atgcgcggctaccccgcgtcctgcaccacgccggtcacagagggcatggtcgtgcgcacg
cagacgccgaagctcgcctcactgcgccgcaacgtcatggagctgtacatctccgaccac
ccgctcgactgcctgacctgcccggccaacggcaactgcgagctgcagacggtggccggc
caggtcggcctgcgcgaagtgcgctatggctacgaaggcgccaaccacctgagcgatgag
aaagacgtctccaacccctacttcgactacgacccgagcaagtgcatcgtctgcaaccgc
tgcgtgcgcgcctgcgaggaaacccagggcaccttcgccctgaccatcgccgggcgcggc
ttcgagtcgcgcgtggcagcggccggcggcgagaacttcctcgactccgaatgcgtctcc
tgtggcgcctgcgtgcaggcctgccccaccgccacgctgatggagaagagcgtggtcgag
atcggccagcccgagcgcagcgtcatcaccacctgcgcctactgcggcgtgggctgctcc
ttccgcgccgagatgaagggcgagcagctggtgcgcatggtcccggacaagaacggccag
gccaaccacggccactcctgcgtcaagggccgcttcgcctggggctacgccacccacccc
gaccgcatcaccaagccgatgatccgcaagcacatcgacgatccctggcaggaagtcagc
tgggatgaagcggtgacctatgcggctagcgaattccgccgcatccagctcaagtacggg
cgcgattccatcggcggcatcacctccagccgctgcaccaacgaagagacctacctggtg
cagaagctggtgcgcgcggcgtttggcaacaacaacgtcgacacctgcgcccgcgtctgc
cactcgcccaccggctacggcctgaagcagaccctcggcgagtccgccggcacccagagc
ttcgactcggtgatgaaggccgacgtggtgctggtgataggcgccaacccgaccgacgcc
cacccggtattcggctcgcagctcaagcgccgcctgcgcgaaggtgcgcagctgatcgtc
atcgacccgcgccggatcgacctggtggattcgccccacgcccgcgccgagctgcacctg
caactgcgtccgggcaccaacgtggcgatgctcaacgcccttgcccacgtaatcgtcacc
gaaggcctggtcaaccagcccttcgtcgatgcgcgctgcgaggcggcggacttcgcccgc
tggcgcgacttcgtcagcctgccggagaactcgcccgaagccctgggcccggtgtgcggc
gtgccgcccgaggaaatccgcgccgccgcccggctctatgccaccggcggcaacgcggcc
atctactacggcctgggcgttaccgagcacagccagggcagcaccgcggtgatgggcatc
gccaacctcgccatggccaccggcaacatcggccgcgaaggcgtgggcgtgaacccgctg
cgcggccagaacaacgtccagggctcgtgcgacatgggctccttcccccacgagttgccc
ggctaccggcacatctccaacgagacggtgcgccaccagttcgagcaggcctggggcgtg
accctgcagcccgatccgggcctgcgcatccccaatatgttcgaggcagcactcgacggc
tccttcaaggcgctgtactgccagggcgaggacatcgcccaaagcgaccccaacacccag
cacgtcaccgccgccctctcggcgatggaatgcgtggtggtgcaggacatcttcctcaac
gagacggcgaagttcgcccacgtcttcctgccgggcagctccttcctcgagaaggacggc
accttcaccaacgccgagcggcgcatctcccgcgtgcgcaaggtgatggagccgctgggc
ggcaaggccgactgggaagccaccgtggccctggccaacgccctgggctaccgcatggac
tacaagcatccgtcggaaatcatggacgagatcgcgcgcctgacgccgaccttcacccgc
gtcagctacgccgagctggagcgccacggcagcctgcaatggccgtgcaacgacgccacg
ccggacggcaccccgaccatgcacatcgagcagttcgtacgcggcaaggggcgtttcatg
ctcaccggctacgtgcccaccgaagagaagatcaacagccgctacccgctgctgctgacc
accgggcgcatcctcagccagtacaacgtcggcgcccagacccggcgcaccgacaacgtc
gcctggcacgaggaagaccgcctggagatccaccccgaggacgcggaaagtcggggcatc
cacgacggcgactgggtcggcgtgggcagccgcgccgggcagacggtgctgcgcgcgaaa
gtcagcgagcgggtggcgccgggggtggtctacacgaccttccacttccccgaatccggc
gccaacgtgatcaccaccgacaactccgactgggccaccaactgcccggaatacaaggtc
acggcggtggaagtcacccgcgtctaccacccctccgagtggcagaagcgctaccaggcg
ttcagcgacgaacaacggcgcctgctcaaggaacgccgccacgccgagaaagccgaggtg
cgccgatga
DBGET
integrated database retrieval system
