Pseudomonas koreensis: AYO71_21335
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Entry
AYO71_21335 CDS
T04647
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00550
Peptidoglycan biosynthesis
pkr01100
Metabolic pathways
pkr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYO71_21335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AYO71_21335
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkr01011
]
AYO71_21335
Enzymes [BR:
pkr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AYO71_21335
Peptidoglycan biosynthesis and degradation proteins [BR:
pkr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AYO71_21335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AMT89964
LinkDB
All DBs
Position
complement(4774908..4776800)
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLIACALFVFAISCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSYNLTITRERATDVNQELDEVINLLHLPAEDRTVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGIDVEPQFVRHYPLGAHFAHSIGYV
GRINEKEAKTLDSVEYRGTQSIGKTGIERFYEAQLHGHVGYEEVETNAQGRVLRVLKHTD
PVPGKNIVLSLDVKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVYDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWYPGETVILGIGQGYMQVTPLQLAQATALIANKGIWNRPHL
AKSVDGVAPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYAAPSKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccaatcccgatcaaggaccatgaaaaagagacgaggctggtcaacaaacgc
ttgattgcctgtgctctgttcgtgttcgccatcagctgcgctttggtggtgcgcctgtac
attctccaggtcgtggaattcgattaccactcgaccatctccgaaaacaaccgtgtccat
gtcctgccgataccgccgacgcggggattgatctacgaccgcaacggcgtattactcgcc
gacaaccgtcccagctacaacctgaccatcacccgtgagcgtgcaaccgacgtcaatcaa
gaattggacgaagtcatcaacttgctgcacttgcctgctgaagaccgcacggtattcgac
aaggcgatgaagcaatcccggcatccattcacaccggtcacactgttttatgagctgacg
gaagagcagatcgccgtcctggcggtgaacgaatttcgcctgccggggattgatgtcgaa
ccgcagtttgtccggcactatcctctcggcgcacatttcgctcattcgatcggttatgtc
ggtcggatcaatgaaaaggaagctaaaaccctcgactccgtggaataccgaggtacgcag
tccattggtaaaaccggtatcgagcgtttctatgaggcgcagttacacggccatgtcggt
tacgaagaagtcgagaccaatgctcaaggccgcgtgctgcgggtgctcaagcataccgat
ccggtgccaggtaaaaacatcgtcctcagtcttgacgtcaaactgcaggaagccgccgaa
gctgctttgggagaccgtcgtggttcggtggtagctctcgatccgtccactggagaagtg
ctggcgatggtcagcaatccgagtttcgatccgaatctgttcgtcaccgggatcagttcg
aaggaatattcagcgctgcgggattccatcgatcggccattgttcaaccgcgtattgcgt
ggcctgtacgccccaggctcgacgatcaaaccggaagtcgccatcgcagggctggacgca
ggcgtcgtaactccgcagacccgcgtatacgatcccggctattaccaattaccggacttc
gatcacaagtatcgcaactggaaccacagcggtgatggctgggtggacatggacgcggcg
atcatgcgttccaacgacacctacttctacgacctggcgcacaagcttggcatcgatcgt
ctgcacgactacatggcgatgttcggccttggtgaaaaagtctcgctggacatgtttgaa
gagtcccccggtctgatgccgtcgcaagcgtggaaacgcgctacacggcgacaggcctgg
tatcccggcgagacggttattctcggcatcggccagggatacatgcaggtcacaccgctg
caattggcccaggccactgccctgatcgccaataaggggatatggaaccggccgcacttg
gccaagtcggtcgacggtgtagcgccggtcgacgaacatccaatgcccaatatcctgctc
aaggacccgcgcgattgggagcaggtcaatcacggtatgcagatggtcatgcacgatgct
cgaggtattgcccgtgcggccgctgcgggtgcgcaataccgcatcgccggcaagagtggc
acggcgcaagtggtagcgatcaagcaaggggagcgctacaaccgcgagaaaaccctggag
cgccaccgtgacaacgccctgtttgtaggattcgcaccggccgaacatccgaagatcgcc
atctcggtaatgatcgaaaacggcgaggcgggtggtcgtgttgccggtccggtcgtgcgg
cagatcatggacgcctggttactcgatcaggatggtcaccttaaacctcaatacgctgcg
ccgagcaaagcgccgggcgatcctcacgtctga
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