Pseudomonas koreensis: AYO71_28195 Help Entry AYO71_28195       CDS       T04647                                  Name (GenBank) DNA ligase B   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pkr  Pseudomonas koreensis Pathway pkr03030   DNA replication pkr03410   Base excision repair pkr03420   Nucleotide excision repair pkr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pkr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AYO71_28195    03410 Base excision repair     AYO71_28195    03420 Nucleotide excision repair     AYO71_28195    03430 Mismatch repair     AYO71_28195  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pkr03032]     AYO71_28195    03400 DNA repair and recombination proteins [BR:pkr03400]     AYO71_28195 Enzymes [BR:pkr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AYO71_28195 DNA replication proteins [BR:pkr03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AYO71_28195 DNA repair and recombination proteins [BR:pkr03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AYO71_28195    NER (nucleotide excision repair)     GGR (global genome repair) factors      AYO71_28195    MMR (mismatch excision repair)     DNA ligase      AYO71_28195   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AYO71_28195 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB RNA_ligase HHH_5 DUF3701 Cobalamin_bind Motif Other DBs NCBI-ProteinID:  AMT91251 LinkDB All DBs Position 6260527..6262203 Genome browser AA seq 558 aa AA seqDB search MLFTLRLSLAFLLALITLVSQANCPNWDRSQAQREITTLQNQIDQWDDAYHREGRSLISD ELYDQSRLRLKEWQACFNQPSSPQPLRTASGTVTHPIAHTGLDKLHKAEDVAHWLRDRQN VWVQPKVDGVAVTLIYHNGILQQAISRGDGVNGQDWTASARRIAAIPQRLRQPRDLLVQG ELYWRLSAHVQSQSGSVNARATVAGLMGRKSLDAEQAAGIGLFVWDWPQGPVRLPERLSE LQTLGFATTEPYTQPVTRFEDAQKWREHWYRSPLPFASDGVVLRQSQRPPAERWQARAPY WAIAWKYPFAQALAEVRKVNFKIGRTGRITPVLELLPVRLDDREIKRVSVSSLKRWQTLD IRPGDQVAISLAGLTIPRLDSVVLRTSERADINIPDAGDYHALSCWQPTPGCESQFLARL TWLSGKQGLAMQHVGRGTWEKLLETGRLKHLLDWLTLDASELANIAGLGERSSARLIDSF QGARQKPFARWLKALGMPPTGQAQLDDSWQALAQRDTEQWQAEAGIGPGRAAQLSAFFRD PQVLALSDTLKAAGIDGF NT seq 1677 nt NT seq  +upstreamnt  +downstreamnt atgctattcacactgcgcctgtcgctggccttcctgctggcactcatcacccttgtcagc caagccaactgtccgaactgggatcgttcccaagcccaacgcgaaatcaccaccctgcaa aaccagatcgaccaatgggacgacgcctatcaccgcgaaggccgttcattgatcagcgac gaactctatgaccagtcccgactgcggctgaaagaatggcaagcctgtttcaaccagccc tcatccccgcagccgttgcgcaccgcgtccggcacggtcacccaccccatcgcccacacc ggcctggacaagctgcacaaagccgaagacgtcgcccactggttgcgcgatcgccagaac gtctgggtgcaacccaaggtcgacggcgtggctgtcacgctgatctaccacaatgggata ttgcagcaggcgatcagtcgcggcgacggtgtcaatggccaggactggacagcctccgcg cgcaggattgcagccattccgcaacgtttgaggcagccacgggatctgctggtacagggc gaactctattggcgcctgagcgcgcatgttcaatcacagtccggcagcgtcaatgcccgc gccaccgttgccgggctgatggggcgcaaatccctcgatgccgaacaggccgccgggatc ggtctgtttgtctgggactggccgcaaggtcctgtgcggctgccggaaagattgtccgaa cttcagacattggggttcgccacaaccgagccctatacccagcccgtcacccgattcgaa gacgcgcaaaaatggcgcgagcactggtatcgctcgccactgccctttgccagcgacggc gtggtgctgcgccagagccaacggccacccgccgaacgctggcaggctcgcgcgccgtat tgggcgatcgcctggaaataccctttcgcccaggcattggccgaagtgcgcaaggtcaat ttcaagatcggccgcaccgggcggatcacgccggtgctggaactgctgccggtcagactc gatgaccgcgaaatcaaacgggtcagcgtcagctcactcaagcgctggcaaaccctcgac atccgtcccggcgatcaggtggcaatcagtctggccgggctgaccattccgcgcctcgac agtgtcgtgctgcgcaccagcgaacgggcggacatcaacatccccgatgctggcgactac cacgccctgagctgctggcaaccgacgccggggtgtgaaagccagtttctcgcgcgtctg acctggctcagtggcaagcagggcctggccatgcagcatgtcggtcgcggcacttgggag aaacttttggaaacaggccgtctgaaacacctgctggattggctgaccctcgatgcgtca gagcttgctaacattgccggcctcggcgagcgcagcagcgcacggctgatcgacagtttt cagggcgcgcggcaaaagccgttcgctcgatggttgaaagcgctgggcatgccgccgacc ggacaggcacaactggacgattcgtggcaggccctggcacaacgcgacactgaacaatgg caggcagaagccggtatcggcccgggacgcgcggcgcaactgagcgcattctttcgcgac ccgcaggtactggctttgagtgacaccctgaaagccgccggaatcgacggcttctga

DBGET integrated database retrieval system