Pantoea ananatis LMG 5342: PANA5342_0089
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Entry
PANA5342_0089 CDS
T01728
Symbol
rbsR1
Name
(GenBank) ribose operon repressor RbsR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plf03000
]
PANA5342_0089 (rbsR1)
Transcription factors [BR:
plf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PANA5342_0089 (rbsR1)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_38
PF0610-like_N
HTH_3
MerR
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CCF07482
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Position
93850..94842
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AA seq
330 aa
AA seq
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MATMKDVARLAGVSTSTVSHVINKNRFVSDGVREKIEQAIRELNYAPSALARSLKLNQTN
TIGMLLTASSNPFYAEVVRGVEDSCYERGYSLILCNTAGDEARMNRSLETLLQKRVDGLL
IMCTESHLPSAEILNRYPSIPTVMMDWAPFEGHGDIIQDNALLGGELATQHLIDSGYSRI
ACISGPLDKTPARMRLEGYYQAMQKSGLHVPPEYVVSGDFEFSGGYNAMFELLALETPPH
AVFTSNDAMAVGVYHALHQAGLQIPQDMAVMGYDDIELARYMSPPLSTIHQPKDELGELA
IDTLIHRLSNPDVSQQTLVLTPELVPRGSV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttggctacgatgaaagatgtcgcccgactggcgggtgtctcaacttcaacggtttcacac
gtcatcaacaagaaccgttttgtcagtgacggcgtgcgtgaaaaaattgaacaggcgatc
cgcgaactcaactacgcaccgtcggcattagcgcgtagcctcaagcttaaccaaactaat
accatcggcatgctgctgactgccagtagcaaccctttttatgcagaagtcgtgcgcggg
gtggaagacagttgctatgagcggggatacagtctgattctttgtaataccgctggcgac
gaagcacgcatgaatcgtagcctggaaacgctgctgcaaaagcgcgttgatggcttgctt
atcatgtgtaccgagagtcatctgccttcggccgaaatccttaatcgttatccttctatc
ccaacggtgatgatggactgggcaccttttgaaggccatggcgatattattcaggataac
gcgttgttagggggagagctggccacgcagcacctaattgacagtggctactcgcgtatt
gcctgtatttctgggccgcttgataaaacacctgcacgcatgcggctggaaggttattac
caggcgatgcagaaaagcggtctgcatgttccgccagaatatgttgtcagtggcgacttt
gagttttcaggcggctacaacgcaatgtttgaattgctggcgctggaaacgccgccgcat
gctgtttttaccagcaacgacgcgatggcggttggcgtttatcacgcattgcatcaggct
ggactgcagattccacaggatatggcggtgatgggatatgacgatattgaactggcacgc
tatatgtcaccgccgctgagtactattcatcaacctaaagatgaactgggcgaactggcg
atagatacgctgattcaccgcctgagcaatcccgacgtcagccagcaaacgctggtactg
acgccggagctggtgccgcgaggctcggtttaa
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