Planctopirus limnophila: Plim_0413
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Entry
Plim_0413 CDS
T01225
Name
(GenBank) glycoside hydrolase family 13 domain protein
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
plm
Planctopirus limnophila
Pathway
plm00500
Starch and sucrose metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
Module
plm_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Plim_0413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plm04147
]
Plim_0413
Enzymes [BR:
plm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Plim_0413
Exosome [BR:
plm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Plim_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Alpha-amylase_C
DUF5696
Motif
Other DBs
NCBI-ProteinID:
ADG66263
UniProt:
D5SPN3
LinkDB
All DBs
Position
519606..521519
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AA seq
637 aa
AA seq
DB search
MVPANVSVENRVSVENQASKPSETAPHHAGMGAILTQQGVAFRVWAPHAEAVSVVGDFND
WQETRHPLSQEYREQLEDHEQAGTAPESVASGFWYGEVTGLSVGAEYLYALKLGEKWMTR
IDPYAKEVTNSVGHAVVTDPHFDWQNDAFELPPRNELIIYEMHIGTFAKDAGDGQPGTLS
SAIRQLDHLRRTGVNCVEIMPLAEFAGDFSWGYNPAHIFAVESSYGGPKAFKEFVREAHQ
RGIGVILDVVYNHFGPSDLSLWQFDGWNENQLGGIYFYNDWRAETPWGSTRPDYGRPEVR
QYLCDNALHWLEDFHCDGLRFDMTLYIRSVRGDGDPGGDLPDGWSLTQWINREIHARHPQ
ALTIAEDLHNKDDLTAPVERGGAAFSAQWDARFVHPVREVLIEPDDDDRSLDSIKGAIFA
TFNGDPFERVIYTESHDEVANGKARIPSEVMPLETRNWFAQKRATLGLALVMTTPGIPMV
FQGQEFLEDGWFRDDVPLDWDKAIELKGILRLFRDLCHLRLNNKGVSRGLTGSGLALLYE
DHTAKTLVFHRWHTPAPHDDIVVILNFYREPRQVEFNFPNAATWQLELNSDARIYSPEFA
NTPCIDQLNLQDEATNPAHHVSLEVGPYSALIFSRQT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggttccagcgaacgtctctgttgaaaatcgtgtatcggttgaaaatcaggcatcgaaa
ccatcagaaacggctcctcatcatgcgggcatgggggcgattcttacacaacaaggtgtg
gccttccgtgtttgggcaccacacgccgaggccgtctctgtggtgggagacttcaacgac
tggcaggagactcgacatccactttcccaggagtaccgcgagcaattggaagatcatgag
caggcaggaactgctccagaatctgtcgcaagtggtttctggtacggcgaagtcacaggg
ctcagtgtcggtgcagagtatttgtacgccttaaaacttggcgagaagtggatgacgcgc
attgacccctacgcgaaagaggtcacgaattccgtgggtcacgccgtcgtgacagatcct
cattttgactggcagaacgatgccttcgaactgccacccaggaacgaacttatcatttat
gagatgcatattggcaccttcgccaaagatgccggcgatggccagcctggaacactttct
tcagcaattcgccagctcgatcatctcagacgcacgggtgtaaactgtgtcgaaatcatg
cctctggcagaattcgctggcgatttctcctggggttacaatcctgctcacattttcgct
gtcgagtcgagttatggcgggccgaaagcctttaaggagttcgttcgcgaagctcatcaa
agaggcatcggggtcattcttgatgttgtctacaatcacttcggtccatctgatctgagt
ctatggcaattcgatggctggaatgaaaatcaactcggcggtatctacttctataacgac
tggcgagctgaaactccctggggcagcacccgcccggattacggccgacccgaggttcga
caatacctgtgtgataatgcactccactggcttgaagactttcattgcgatggcctccgc
tttgatatgacgttatatattcgcagtgtgcgtggcgatggcgaccccggcggtgatctc
cctgatgggtggtctctaacgcagtggatcaatcgcgaaatccatgcgcgccatccccag
gccctgacaatcgcggaagatcttcacaataaagatgatctgacagcacccgtcgaacga
ggcggagctgccttctccgcgcagtgggatgccaggtttgttcatccagtacgagaagtc
ctgattgaacccgatgatgatgaccgttcactcgattccattaagggggccatcttcgcc
actttcaacggcgacccatttgaacgtgtcatctataccgaatctcacgatgaggtagca
aacggcaaagcccgcatcccttcagaagtcatgccgctcgaaactcgcaactggtttgcc
cagaagcgcgccactttaggcctcgccctggtcatgacaacccccggaattccaatggtc
tttcaaggacaggaatttctggaagacggctggttccgcgacgacgtgccactcgactgg
gataaagctattgaactcaaaggaattctccggctattccgggatctttgccacttgaga
ctcaataacaaaggcgtctctcgcggattgacaggttcaggacttgcactgctatatgaa
gaccacaccgctaaaacattagtattccaccgctggcatacaccagccccacacgacgat
atagtagtgatcctcaatttttaccgcgaaccccggcaggtcgagttcaatttccctaat
gcagcgacctggcaactggaattgaattcagacgccaggatttacagtccagaattcgcc
aatacgccctgtatcgatcagctgaatctgcaggatgaagccaccaatccagctcaccat
gtttcgctcgaagtcggcccttactcggccttgatcttttcgcgtcaaacgtag
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