Planctopirus limnophila: Plim_2306
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Entry
Plim_2306 CDS
T01225
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
plm
Planctopirus limnophila
Pathway
plm02010
ABC transporters
plm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Plim_2306
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Plim_2306
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plm02000
]
Plim_2306
Transporters [BR:
plm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Plim_2306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ADG68132
UniProt:
D5SNL8
LinkDB
All DBs
Position
2981814..2983073
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AA seq
419 aa
AA seq
DB search
MPTCFATSDSESCISLARDKTLTHLTKRTSSLCQFLRLSKLVGIFLLALMSLTTLGCQSR
VASTDEIVIGHFGSITGSEATFGISTDRGIQLAIEEVNAAGGVNGKKVRLITYDDKGDPR
EAGSAVTRLVTRDQVTAVLGEVASGLSLAAAPICQENGVPMISPSSTNPKVTQVGDMIYR
VCFIDPFQGSVCAKFARENEKIKATKAAILCDQTAPYSVGLQEEFEKAFVAGGGTIVSKQ
AYQAGDQDFSAQLTSIRASEPEVIFIPGYYTDVGNIALQAKKLGLKVPMLGGDGWDSAKL
GQIAGDALNGCYYSNHYSHEDPSPRVQNFIKLYQGKYQETPDGLAALGYDAARILFNAMK
TAPSLSGKDIAAELAKTTGFEGVTGVISMDANRNPVKPAVILEMKDGTPRYVATIAPGE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccaacctgctttgccacttcagactctgaatcgtgcatttccctcgccagggacaag
acgctaactcacttgacgaaaagaacatcgtctctgtgtcagtttttgcgactctcgaag
cttgtggggatttttctgctggccttgatgagcctgacgacgctggggtgccagtcacgt
gtcgcgtcgacagatgagatcgtgattggccattttggctcgatcacaggttccgaagcg
acctttggcatttcaacggatcgcgggattcaactagcgattgaagaagtcaatgccgcc
ggcggggtgaacggtaagaaagttcgcctcatcacttacgatgacaaaggcgatcctcgc
gaagccggttcggctgtgacaagacttgtcacgagagatcaggtcacggcagtgctgggt
gaagtggcttccggactttcactggccgcagccccgatctgccaggaaaacggcgttccc
atgatctccccgtcttcgacgaatcctaaagtcacacaagtgggagacatgatttaccgc
gtctgtttcatcgatcccttccagggatcggtctgtgccaagttcgccagggaaaacgaa
aagattaaagccacaaaggctgcgattctttgcgatcagacagctccctactcggtaggt
ttgcaggaagagttcgaaaaagcctttgttgccggtggagggacgattgtttccaagcag
gcctatcaggcgggtgatcaggatttttcagcacaactgacatccattcgagccagtgaa
cctgaggtgattttcatccctggttactacaccgatgtcgggaatatcgccctgcaggct
aagaagttgggactcaaagtcccgatgctgggtggagatggctgggactccgccaagctg
gggcagattgccggcgatgcattaaatggttgttactattccaaccattattcgcatgaa
gatcccagtccccgcgtgcagaatttcatcaagctttatcaggggaagtatcaggagaca
cctgatggcctggcggccctgggttatgatgcggctcgtattcttttcaacgcgatgaaa
actgcaccttctttgagcggcaaggacattgccgccgagttggccaagacgacgggcttt
gagggtgtgacgggtgtgatttcgatggatgccaatcgtaacccggtcaagccagccgtc
attctggaaatgaaggatggaaccccccgatatgtcgccacgattgctcccggcgagtaa
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