Candidatus Portiera aleyrodidarum BT-QVLC: C548_130
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Entry
C548_130 CDS
T02307
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plo
Candidatus Portiera aleyrodidarum BT-QVLC
Pathway
plo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C548_130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plo03019
]
C548_130
03016 Transfer RNA biogenesis [BR:
plo03016
]
C548_130
Enzymes [BR:
plo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C548_130
Messenger RNA biogenesis [BR:
plo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C548_130
Transfer RNA biogenesis [BR:
plo03016
]
Prokaryotic type
tRNA degradation factors
C548_130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
KH_2
PNPase
Motif
Other DBs
NCBI-ProteinID:
AFT80496
LinkDB
All DBs
Position
149471..151429
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AA seq
652 aa
AA seq
DB search
MSVFYQEKYYAAGKIPGGFFKREGRATEKEILTSRLIDRPIRPNINNFYNNEIQIICTVL
SAKKNTDITAMIGTYAALGITDIPLKQSMGVARVGFNKEVGFWLDITKEKCSELDIVVAG
TKKSVLMVETEAKQKTEAIIIGAISFAHRELQVVIKNIKEFSKDYKTKNINNKFKSNKLK
VHISSFKDYLFKKFNHSINDTFYIVDKIKRKEALIIITNQVFETFINHFLTLFYIYENLN
LIIKKIFINFLFSIKKRIDGRDFKTIRSLSIELCCLPCTHGSALFCRGDTQAIVALTLGS
LRDAQFIEGLEEDRYDNIMFHYNFTPYSVCEIGFIGMPKRREIGHGNLAKRAILGVVSKD
EFPYSIRIVSEITESNGSSSMASVCGASLALMHAGVPLRTTVAGVSMGLITKKEHFFVLT
DIVDEEDKFGDMDLKIAATFKGITALQMDIKQQGSKTDQKEILQRTLNQALEAIKQISAK
MNVVISQSRKSISINAPSYVVLKIETEKLRDVIGKGGTTIKKICEFTNSAIEIQDDGNIH
IYAKTKLNLQKAIEAIKLITEETKLNKLYRGKVIRIMEFGAFINLLPGIDGLVHVSQISS
CHVTNIREFISEGDIVTVKVLEKDHKGKLKLSIKEIDPIEKSIFEAKIQSFI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgtattttatcaagaaaaatattatgctgcaggtaaaattccaggtggctttttt
aaaagagaaggccgcgctacagaaaaagaaatattaacatcaagactaattgatagacct
ataagaccaaatataaacaacttttataataatgaaatacaaataatttgtaccgtgctt
tctgctaaaaaaaatacagatattaccgctatgattggtacatatgcagctctaggtatt
actgatatacctttaaaacaaagtatgggtgttgctagagtaggttttaataaagaggtt
ggtttttggcttgatataactaaagaaaaatgttcagaactagatatagtcgtagccggc
acaaaaaaatccgtattgatggtagaaacggaagcaaaacaaaaaacagaggcaataatt
ataggtgctattagttttgcacatcgagaattgcaagtcgttataaaaaatataaaggaa
tttagtaaagattataaaactaaaaacattaataacaaatttaaatcaaataaactaaaa
gttcatatatcttcttttaaagattacttatttaaaaaatttaatcatagtattaatgat
actttttatatagttgataaaatcaaaagaaaagaggcattgataattataactaaccaa
gtgtttgaaacatttataaatcactttttaacacttttttatatttatgaaaatttgaac
ttaataattaaaaaaatctttataaactttttgttttccataaaaaaaagaattgatggt
cgtgattttaaaaccattcgttcattatccattgaattatgttgtttaccttgtactcat
ggctctgctttgttttgcaggggtgatactcaagccatagttgctctaactctgggaagt
ttacgtgatgctcaatttattgaaggattagaagaagaccgttatgataatataatgttt
cattataattttaccccttatagtgtctgtgaaataggttttataggtatgccaaaacgg
cgtgaaattggccatggtaatcttgcaaaaagagcaatacttggtgttgtatctaaagac
gagtttccatactcaataagaattgtttcagaaattactgaatcaaatggctctagttct
atggcgtctgtatgtggtgcttcattagcattgatgcatgcaggagtaccattaagaaca
acagtagcaggtgtttctatgggtttgataacaaaaaaagaacactttttcgtacttaca
gatattgtagatgaggaagataaatttggtgatatggatctaaaaattgctgctacattt
aaaggtataacagccttacaaatggatataaagcaacaaggcagtaaaacggatcagaaa
gagattttacaaaggactttgaatcaagctttagaggctataaaacagattagtgcgaaa
atgaatgtagtaataagtcaaagtagaaaaagtatatctataaacgcacctagttatgtt
gtattaaaaatagaaacagaaaaattacgtgatgtaattggtaaaggtggtactactata
aaaaaaatatgtgagtttaccaattctgctatagaaattcaagatgatggcaatatacat
atttatgccaagactaaattaaatttacaaaaggcaatagaagctataaagttgattact
gaagaaacaaaactaaacaagttatatagaggtaaagttatacgcatcatggaatttggt
gcttttattaatttattgcctggtattgatggtttagttcatgtttcacaaattagttct
tgtcatgttacaaatataagagaatttattagtgaaggagatattgtgacggtaaaagtg
ttagaaaaagatcataaaggaaaacttaaattatccataaaagaaatagatcctattgaa
aaatcaatatttgaagctaaaatacaatcatttatataa
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