Photorhabdus laumondii subsp. laumondii TTO1: plu0386
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Entry
plu0386 CDS
T00149
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Pathway
plu03030
DNA replication
plu03410
Base excision repair
plu03420
Nucleotide excision repair
plu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
plu0386 (polA)
03410 Base excision repair
plu0386 (polA)
03420 Nucleotide excision repair
plu0386 (polA)
03440 Homologous recombination
plu0386 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plu03032
]
plu0386 (polA)
03400 DNA repair and recombination proteins [BR:
plu03400
]
plu0386 (polA)
Enzymes [BR:
plu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
plu0386 (polA)
DNA replication proteins [BR:
plu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
plu0386 (polA)
DNA repair and recombination proteins [BR:
plu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
plu0386 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
plu0386 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAE12681
Pasteur:
plu0386
UniProt:
Q7N9F1
LinkDB
All DBs
Position
417018..419807
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIADNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRTQIEPLHQMVEAMGLPLLVVPGVEADDVIGT
LALQAEKEGRAVLISTGDKDMAQLVTPNITLINTMNNTILGPEEVVEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALGLLQGIGGMDDIFANLDKIAGLSFRGAKTLADKMVQHK
DVAYLSYQLATIKTDVELDKTCVALSVKEPDTEKLHQLFSRYEFKRWLSDVANGDWLAEK
GKKPVSTGNDESSPTEDKSAAATLSSDNYQTILDQQSFDEWIEKLKKASVFAFDTETDSL
DTLTANLVGVSFAISAGDAAYLPLGHDYLGAPEQLDREVVLAALKPLLEDSNLLKIGQNI
KFDRGVLARYGIELQGIAYDTMLESYVLNSVAGMGRHDMDSLAERHLNHKTTTFEEIAGK
GKNQLTFNQVAVEQAAMYAAEDADVTLLLHQAMWPQLEKAPTLEKVFLNTEMPLVMVLSR
MERTGVLIDANILAEHSKEITARLDELEKEAHELAGEVFNLASPKQLQTILFEKLQLPVV
KKTPNGAPSTNEEVLEELADTHALPKVILEHRGLAKLKSTYTDKLPQMVHPLTKRVHTSY
HQAVTATGRLSSRDPNLQNIPVRNKEGRRIRQAFVAPEGYRIMAADYSQIELRIMAHLSQ
DQGLLKAFAEGKDIHRATAAEVFGLPLEQVTSEQRRSAKAINFGLIYGMSAFGLSRQLGI
PRGEAQRYMDLYFERYPGVLAYMERTRKQAEEQGYVETLDGRRLYLSDIKSRNAMRRKAA
EREAINAPMQGTAADIIKKAMIAVDDWIVSEEPKVRMIMQVHDELVFEVHESELEYAEQK
IRELMEKSMVLDVPLKVDVGIGDNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatagcagacaatcccctgattttggttgatggctcctcatacctttatcgt
gcttatcatgctttccctccgctgacgaatagcgcaggggagccgaccggagccatgtat
ggtgtattgaatatgctccgcagcttgataatgcagtacaaaccaagccatgtagcggtg
gtatttgatgctaaaggcaaaacttttcgtgatgaattgttcgctgagtataaatctcat
cgtcctcctatgccggatgatctgcgtacgcagatagaaccgctacatcagatggttgaa
gctatgggattaccattgctggtggtgcccggagtagaagctgatgatgttatcgggact
ttggcgttacaggcagaaaaagaggggcgtgcggtacttatcagcactggcgataaagat
atggcgcaactggtcacgccgaatatcacgcttatcaataccatgaataacaccattttg
gggccggaagaggtcgttgaaaagtatggtgtgccgccggagctgattatcgattttctg
gcattaatgggagactcttctgacaatattcctggcgtacctggggtgggagaaaaaacc
gcactgggattactgcaagggattggtggcatggatgatatctttgccaatctggataaa
attgccgggctcagtttccgtggggcgaaaacgctggcggataagatggtgcagcataaa
gatgtcgcttatctctcctatcaactggcaactattaaaaccgatgttgagttggataaa
acctgcgttgctttgtcagtcaaagagcctgatacggagaaactgcaccagttgttttct
cgttacgagttcaaacgttggttaagtgatgtggcaaacggcgattggttggcagagaaa
ggcaaaaaaccggtatccactggtaatgatgaatcatctccgacggaggataaatctgcg
gcggccacactctcttctgataattatcagactattcttgatcagcaaagctttgatgag
tggattgagaaactgaaaaaagcgtctgtttttgcttttgataccgaaactgacagcctt
gatactttgactgctaatctggtgggggtgtcattcgcaatttctgccggcgatgcggct
tatctacctctagggcatgactatctgggcgcgcctgaacaacttgacagagaagttgtg
ttggctgcattaaaaccgctacttgaagatagtaacctgctgaaaattggtcagaatatt
aagtttgatcgtggcgtgttggcgcgttacggcattgaactgcaaggcattgcttacgat
accatgctggaatcttacgtacttaatagcgttgcaggcatgggtcggcatgatatggat
agcttggctgaacgccatttgaatcataagaccacgacttttgaagagattgctggtaaa
ggtaaaaatcagctcacttttaatcaggtcgcggtggaacaggccgcaatgtacgccgca
gaagatgcagatgttactttattgctgcatcaggctatgtggccgcaattggagaaagcg
ccgacgctagaaaaggtattcctgaatacagaaatgccactggttatggtgctttcccgc
atggaacgtacaggtgtacttattgatgccaatattttggctgagcattcaaaagagatc
actgcccgtctggatgagttggaaaaagaagcgcacgaattagcaggtgaagttttcaat
ctggcttcgccaaaacagttacagacgatattgtttgaaaaattgcaattgccggtggta
aagaaaacgccaaatggtgcgccatccacgaatgaagaggtactggaagagttggcagat
acccatgcattgccgaaagtgatcttagagcatcgtgggttggcaaaattgaaatccact
tacaccgataaattaccgcagatggtccatccgctgaccaaacgggtgcatacttcctat
caccaagcggtaacggcaaccgggcgtctctcttcacgtgatcctaatttgcaaaatatt
cctgtccgtaataaagagggccgccgcattcgtcaggcatttgtggctcctgaaggttac
cggattatggccgctgactattctcagattgaattgcggataatggctcatttgtctcaa
gatcaagggttgttgaaggcttttgctgaggggaaagacattcatcgggcaacggcggcg
gaagtctttggtttgccactggaacaggtaaccagtgagcagcgccgtagtgccaaagcg
attaactttggtttgatctatggtatgagtgcatttggtctttcccgtcagttaggtatt
cctcgtggtgaagctcaacgctatatggatctctattttgagcgctatccgggggtattg
gcgtatatggagcgtactcgtaaacaagcggaagagcagggttacgttgaaacgctggat
ggtcgtcgtctttatctgtcagatatcaaatctcgcaatgccatgcgccgtaaggcagca
gagcgtgaagctattaacgcgccaatgcagggaactgcggcggatatcattaaaaaagcg
atgattgcggtggatgattggattgtcagtgaagaaccgaaagttcgtatgattatgcag
gttcacgatgagctggtatttgaggttcatgaatcagaacttgaatatgcagaacagaaa
attcgtgaattgatggagaagagtatggtgcttgatgttccattgaaagtagatgtaggt
atcggtgacaattgggatcaggcgcattga
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