Pseudomonas mandelii: OU5_0645
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Entry
OU5_0645 CDS
T03626
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pman
Pseudomonas mandelii
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pman03400
]
OU5_0645
DNA repair and recombination proteins [BR:
pman03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OU5_0645
Archaeal homologous recombinant proteins
OU5_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_21
SMC_N
AAA_29
ABC_tran
AAA_15
nSTAND3
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHZ67724
UniProt:
A0A024E476
LinkDB
All DBs
Position
765999..769640
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LSNAQVSAKAPDADGEISTGDPRTLLRRGTGEGYAEVDFVGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKVEFKTQLEAVLGLNFEQFTRAVLLAQSEFSAFLKAN
DNERSELLEKLTDTALYTRLGRRAFDKAKEAREAHKLLQDQATGVTPLAPEARAELDARF
NEAQQQLKTQQAQLKQLELQHTWLKDLRQLQDEQQSATEQLTSAQQHWESLAGDRLKLTR
LEQLAPQRHQFARKTELTAQLTPLAAQIQQHIQQQAELNERQAQLEQSLSAAQTALVDAQ
SQHTKKAPLLRQAFEEQSTLARLVKDASVSAEHKQQAELASTQGQHTIQGLLEQQKQVAA
RLERIAGELEQSTHLAPLSEAWNAYRDRLQQLMLIGNRLNKGQAELAALEQSAARAGEEL
TAQKQHLEVLYKEAGAEPEAVAEQIQLLGNLLQDNRKQLRAFEELTRLWASQQEIDKRSA
ELTQRQLSAQQERDRLTQDGVKTKNELVIAEQTLTVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSPDHPYHQPEALLQSLGRHDESEQANAQKAVDLLKEKLTDLRGEVGGLIAQ
QKELLQQQEQLASQQQGLTPSLEAHPLSTQLLAQDANKRDSWLAQQNSQLNQSITQDEQR
QTALLTLQQDAARLQQQLRSAEAASQQATQHLSNQQRELGSDRQRLDEELNAFSTLLPAE
TLEALRNEPAATFMQLDRQIAQRLEQLEQQRDELGEQQQRQQTLEKEQDRQLARAQALEL
AQQQFTVLAEQQQACQERLTQLLGEHSSAEHWQQQLDQAVEQARTAQATAHQELQTVRTR
LVELAAELKARQERLLALETEDRELSAKIADWRALHPELDDGGLEALLSVDDQHVSELRQ
HLQQSEKAIEQANVRLQERDQRLLNHQAQHNGNLDAEQLATALTDLQNLFAASEHRCAEL
RAEQAEDQRRQNANQALAQQIADAFSEYQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
QRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgcgatccgcctgaaaaacctcgcctcgctggccgggccctttgaaatc
gactttaccgctgaaccgctggcgagtgccggcctgttcgcgatcaccgggccgaccggc
gcgggtaaaagcaccttgctcgacgccttgtgtctcgcgctgtttggcgccgttccgcga
ttgagcaacgctcaggtgtcggccaaggcaccggacgccgatggcgaaatcagcaccggc
gacccgcgcaccttgctgcggcgtggcaccggcgaagggtatgccgaggtggatttcgtc
ggcatcgatggccgtcgttaccgtgcgcgctgggaagccaatcgcgctcgcgaaaaggcc
ggcggcaagctgcaagccagtcgtcagagcctgcgcgacatcgatcaggatcagttgctg
gccagtcagaaagtcgagttcaaaacccagctcgaagccgtgctgggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcccagagcgagttcagtgccttcctcaaggccaac
gacaacgaacgcagcgaactgctggaaaagctcaccgataccgcgctgtacacccgcctc
ggtcgccgcgccttcgacaaagccaaagaggcgcgtgaagcgcacaagctgttgcaggat
caggccacgggggtgacgccactggctcccgaagcccgggccgagctcgatgcgcgcttc
aacgaagcgcagcagcaactcaagacccagcaagcgcagctcaaacagcttgaattgcag
cacacctggcttaaagacctgcggcaattgcaggacgaacaacagagcgccaccgaacag
ctgaccagcgcccagcagcactgggaaagcctggctggcgaccggttgaagctgacgcgc
ctggaacaactggccccgcaacggcaccagttcgcccgcaagaccgaactcaccgcccag
ctcaccccgctggcggcgcagattcagcagcacatccaacagcaggccgagttgaacgag
cggcaggcgcaactcgaacagagcttgagcgctgcgcagactgcgctggtcgacgcccaa
agccaacacacgaaaaaagctccgttgctgcgccaggcctttgaagagcaaagcaccctc
gcccggctggtcaaagacgccagtgtgagtgcagagcacaagcaacaggcggaactggcc
agcactcaaggacagcacacgattcagggcctgcttgagcaacaaaaacaggtggctgca
cgtctggagcggattgccggggagcttgagcaaagcacgcatttagcaccgttgagcgag
gcgtggaacgcctaccgtgatcgcttgcaacagctgatgttgatcggtaatcgcttgaac
aagggccaggctgaactggcggctctggagcaaagcgccgcccgcgccggcgaagaactg
acggctcaaaagcagcatctggaagtgctctacaaagaagccggtgccgagccggaagcc
gtggccgaacaaatccagttactgggcaacttgttgcaggacaaccgcaaacaactgcgg
gcgtttgaagaactgacacggctgtgggccagccagcaggagatcgacaagcgcagcgcc
gagctgacgcaacgccagctcagcgcccagcaggaacgtgatcgcctgacccaggacggc
gtgaagaccaagaacgagttggtcatcgccgaacagaccctgaccgtcactcgcgaactg
ctggagcgtcagcgtctggcccgcagcgccagcgtcgaagaactgcgcgcacagctacag
gacgatcagccctgcccggtctgcggcagccccgaccatccctatcatcaacccgaagcg
ttgctgcaaagcctcggtcgccacgatgaaagcgagcaggccaatgcgcagaaggccgtc
gacctgctgaaagagaaactcaccgatttgcgcggtgaagtcggcggtttgattgctcag
caaaaagaactgctgcagcaacaggagcaactcgccagccagcaacaaggcctgacgccg
agcctcgaagcccatccgttgtcgacgcaactgctggctcaggacgcgaacaagcgcgac
agttggctggcgcagcaaaacagccagttgaaccagagcatcacccaggatgaacaacgg
cagaccgccctgctcaccctgcagcaagacgcggctcgccttcaacagcaactgcgcagt
gccgaggcagctagccagcaagcgacgcagcacttgagtaaccagcagcgtgagctgggc
agtgatcgccagcgcctcgatgaagagctgaacgccttcagcaccctgcttccggccgag
acactggaggccttgcgcaacgaaccggccgcgaccttcatgcaactcgaccggcagatc
gcccagcgcctggagcaactcgaacagcaacgcgatgagctcggcgaacagcaacaacgc
cagcagacactggaaaaagaacaggaccgccaactggcccgcgcccaggcactggaattg
gcgcagcagcaattcaccgtcctcgccgagcaacaacaggcttgccaggaacggctgacg
caattgctgggcgaacacagcagcgccgaacactggcagcagcaactggatcaagccgtc
gaacaggcgcgcactgcccaggcaacagcccatcaggaactgcaaaccgtgcgcacgcgg
ttagtcgaactggccgctgaactcaaagccagacaagagcgcctgttggccctggaaacc
gaagaccgcgaactgagcgcaaagatcgccgactggcgcgccttgcatccagagctcgac
gatggaggactggaagcgctgctgagcgtcgacgaccagcacgtcagcgaactgcggcag
cacttgcagcaaagcgaaaaagccatcgaacaggccaacgtgcgattgcaggaacgggac
cagcgtctgctcaatcatcaggcgcaacacaacggcaatctcgatgccgagcaactcgcc
acggcactgacagacctgcaaaacctgttcgccgccagcgagcaccgttgcgccgaactg
cgcgccgaacaggccgaggatcagcgtcggcagaacgccaaccaagccctggcgcagcag
atcgccgacgccttcagcgagtaccagcgctgggctcgcctgaatgcgttgatcggctcg
gcgaccggcgacaccttccgcaagatcgcccaagcctacaacctcgacttgctggtgcat
cacgccaacgtacagctgcgacaactggtgcggcgctatcgcctgaaacgcggcggcagc
atgctcgggttgctggtgatggacaccgagatgggcgatgagctgcgttcggtgcattcg
ttgtcgggcggcgagacgttcctggtgtcgttggccctggcgctcggtttggcgtcgatg
gcttcgagcacactgaaaatcgaatcgctgttcatcgacgaaggcttcggcagcctcgat
ccggaatccctgcaactggccatggacgcactcgacggcttgcaagcccagggccgcaag
gtggcggtgatttcccatgtgcaggaaatgcatgagcggattccggtgcagattcaggtc
caacgccagggcaatggcttgagtaccctggaggtcaaatga
DBGET
integrated database retrieval system
