Pseudomonas mandelii: OU5_5148
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Entry
OU5_5148 CDS
T03626
Name
(GenBank) sigma-54 dependent transcription regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pman
Pseudomonas mandelii
Pathway
pman02020
Two-component system
pman02025
Biofilm formation - Pseudomonas aeruginosa
pman02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OU5_5148
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OU5_5148
09142 Cell motility
02040 Flagellar assembly
OU5_5148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pman03000
]
OU5_5148
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pman02035
]
OU5_5148
Transcription factors [BR:
pman03000
]
Prokaryotic type
Helix-turn-helix
Other families
OU5_5148
Bacterial motility proteins [BR:
pman02035
]
Flagellar system
Flagellar assembly proteins
Others
OU5_5148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
GAAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHZ72227
UniProt:
A0A024EHF3
LinkDB
All DBs
Position
5711205..5712680
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPGALPGLLKTLATWDEFLPVLLMGDNSSIDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEIGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHTPD
FTANAMLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRRDGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgattgacgacgatagcgtccgccgccgcgatttg
gcggtgattttaaattttcttggcgaagaaaatttaccctgcggtagccatgactggcag
caggctgtcggctctttgtcatcaagtcgtgaagtgatctgtgtcctcatcgggacggtc
aatgctcctggcgcacttccgggcctgttaaagacactcgcaacctgggatgagttcctt
ccggttttgttaatgggcgataattcttccattgacttgcctgaagaccagcgtcgccga
gtgctttcgaccctcgaaatgccacccagctacagcaaattgctcgactcgctgcaccgt
gcgcaggtctatcgcgagatgtacgaccaggcccgcgagcgcggtcgtcatcgcgaaccc
aaccttttccgtagccttgtcggcaccagccgggcgattcagcacgtccgtcagatgatg
cagcaagtggccgataccgacgccagtgtgctgatccttggcgagtccggcaccggcaag
gaagtggtcgcgcgcaacctgcactaccactccaagcgtcgtgacgcgccgttcgttccg
gtcaactgcggggcgatcccggccgagttgctggaaagcgaattgttcggccacgagaaa
ggcgctttcaccggggcgatcaccagccgcgccgggcgttttgagttggccaatggcggc
accctgttcctcgacgaaattggcgacatgccgttgccgatgcaggtcaagttactgcgc
gtgttgcaggagcgcactttcgagcgcgtgggcagcaacaagacccagagtgtcgacgtg
cgcatcattgcggcgactcacaagaatctcgaaagcatgatcgagatcggcacgttccgc
gaagacttgtactaccgcctgaacgtgttcccgatcgagatggcgccgctgcgcgaacgt
gtcgaagacatcccgttgctgatgaacgagttgatctcgcgcatggagcacgagaagcgt
ggttcgatccgcttcaactcggcggcgatcatgtcgctgtgtcgtcacggttggccgggc
aacgttcgcgaactcgccaacctggtggaacgcatggcgatcatgcacccctacggggtg
atcggcgtggtcgagctgccgaagaaattccgctacgtcgatgatgaagacgagcaactg
gtcgacagcctgcgcagtgatcttgaagagcgggtggccatcaacggtcataccccggac
ttcaccgccaacgccatgctgccgccggaaggcctggacctcaaagactacctcggtggt
ctggaacagggcttgattcagcaggcgctggatgatgccaatgggatcgtggcgcgtgcc
gcagaacgcctgcgtattcgtcgtaccacgctggtggagaagatgcgcaagtacggcatg
agccgtcgcgacggtgatgaacaggcggatgattga
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