Prochlorococcus marinus NATL1A: NATL1_10421
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Entry
NATL1_10421 CDS
T00467
Symbol
vacB
Name
(GenBank) putative acetazolamide conferring resistance protein Zam
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
pme
Prochlorococcus marinus NATL1A
Pathway
pme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NATL1_10421 (vacB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pme03019
]
NATL1_10421 (vacB)
03016 Transfer RNA biogenesis [BR:
pme03016
]
NATL1_10421 (vacB)
Enzymes [BR:
pme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NATL1_10421 (vacB)
Messenger RNA biogenesis [BR:
pme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NATL1_10421 (vacB)
Transfer RNA biogenesis [BR:
pme03016
]
Prokaryotic type
tRNA degradation factors
NATL1_10421 (vacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
SnoaL_5
Motif
Other DBs
NCBI-ProteinID:
ABM75600
CyanoBase:
NATL1_10421
UniProt:
A2C290
LinkDB
All DBs
Position
959193..961502
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AA seq
769 aa
AA seq
DB search
MTSVLKILESLDCEDGLEVSKLERSLKITKKIDKDNLNVAIKALTKLGIVQTIIDDKLTI
NNDIDFLRGRVRCSSKGYCFVVREDQGEDIYIRESNLNNAWHGDSVFVLITKHGVRRRAP
EGKIQCVLQRYNDTLLAKVEPDKTTGELKAYPLDDRIPVTIELEDVIETNKKYPDKDLIH
EIKITKYPIAQFNAKGSIVRELSINSGVEGDIELLLSKNNISKSLVAPKVAPKKISSKGR
SDLTAQPSLLFESWESTNSPSLPGLYAQPYEGGNRIWVHAPTISERINLGGKLDRYLKDK
GEVICLGNNWLEFLNESLRSASQFKINEECEAISLMIDINADGNITDWKFTLSIIKPVKI
ITPKHLTAINNRKAKSKSVPIALKGIKDNLEVLYTLLHSAKIINNMNNNSIKLDEYIPKL
ERLSELSKTFPGRDFHGWSKTYDCCDPQSLIDIYIRLSNNILSKHLIGYRLPFIYKEHEE
IDQSSINELTKSALALDKKITVNVDGTITSSELIKSFESSSEKKILHKLVKHIIPGVHLK
LYEINTHEDITHLNHDAAQTNIESPWCCPSLNYWNIFNQFILSLLLSEGKSKSSSRSKQT
VELGKNDSWREVDWEIFPSKLKEIIGNHSNSRLINNLNEIRKKSKSFRNNIISIAQGREA
QKIIGKEVTAIITGVQSYGFFAEIDDLTAEGLVHVSTLGDDWYEYRSRQNLLVGRKSKKT
YQLAQKINVRVLKVDILKNQIDLELVKETGTETETETINTIKVESDNED
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagttctaaaaatactagaaagtctagattgtgaggatggattagaagtttca
aaacttgagagatccttaaaaatcacaaaaaaaatcgataaagataatttaaacgtagct
attaaagctcttacaaaactaggaatcgtacaaactattattgatgataaactgacgata
aacaatgatatagattttttgcgaggtagggtgcgttgtagtagtaaaggctattgtttt
gttgttagagaagatcaaggtgaagatatttacattagagagagtaatttaaataatgcc
tggcatggcgattctgtatttgtattaataactaagcatggagtaaggaggagagcacct
gaagggaaaatacaatgtgttttacaaagatataatgatactttgctggcaaaagttgaa
cctgacaagaccactggagaattaaaggcctaccctttagacgacagaataccagtaaca
attgaacttgaagatgtgatagaaactaataagaaatatcccgataaagatttaattcat
gaaataaagataactaaatatccaattgctcaatttaatgctaagggttcaattgttaga
gaattatcgattaattcaggagtggagggagatattgaattattactttccaagaataat
atatctaagagtttggtagcacctaaagttgctcccaagaagatttcctcaaaaggaaga
tcagatttaactgctcaaccttctttattatttgaaagttgggaatctactaattcacct
tctcttcctggattatatgcgcaaccctatgaagggggtaatagaatatgggttcatgca
cctactatctctgaaagaatcaatttaggcgggaagctagatagatatcttaaagataaa
ggtgaagtgatttgcttaggtaacaactggctagagtttcttaatgaatcacttagatca
gcatctcaatttaaaatcaatgaggaatgcgaagctatttcattgatgatagatattaat
gccgatggcaatataactgattggaaattcacactcagtattattaagcctgtgaaaatc
attactccaaaacaccttacagctatcaacaacagaaaagctaaatcgaagtcagttcct
atagctcttaaaggtattaaagacaatctagaagtcctttatactcttttacattcagcc
aaaataattaataatatgaacaataattctattaaattagatgagtatattcctaaatta
gagagattaagtgaattatcaaaaacttttcctggcagggactttcacggatggtctaaa
acttacgattgttgcgatccacaatctctaatagatatttatataagactttcaaataat
attctttcaaaacatttaataggctatagattaccatttatttataaagagcacgaagaa
attgatcaatcatctattaacgaattaactaaatcagcattggcattagataaaaaaata
accgttaatgttgatgggacaataacatctagtgaattaataaagtcatttgaatcaagt
agtgaaaagaaaatacttcataaacttgttaaacatataattcctggagttcatttaaaa
ctatacgagataaatactcatgaagacattacgcatttaaatcatgatgcagcacagact
aatattgaatctccttggtgttgcccatccttaaactactggaatatatttaatcagttt
atattatctttacttttgtctgaaggtaaaagtaaatcttcaagccgaagtaaacaaact
gtcgaattaggtaaaaatgatagctggagagaagttgattgggaaatatttccatctaag
cttaaagaaattattggtaatcattcaaattcaagattaattaataatttaaatgaaatt
agaaaaaaatctaaatcatttagaaacaacatcatttcaattgctcagggtagagaggct
cagaaaattataggtaaagaggtaacagctattataactggtgtacaaagctatggtttt
tttgctgagatagatgacttaactgctgaaggcttagtccatgtaagtactttgggtgac
gattggtacgaatatagatctaggcaaaaccttttagtaggtagaaaaagcaaaaaaaca
tatcaacttgcgcaaaaaatcaatgtcagagttttaaaagttgacattctaaaaaatcaa
attgacttggaacttgtaaaagaaacaggaacagaaacagaaacagaaacaataaatact
attaaagttgaatctgataatgaagattaa
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