Pseudomonas mendocina NK-01: MDS_0667
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Entry
MDS_0667 CDS
T01473
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MDS_0667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_0667
Enzymes [BR:
pmk01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MDS_0667
Transporters [BR:
pmk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MDS_0667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_30
NB-ARC
nSTAND3
APS_kinase
nSTAND1
MMR_HSR1
AAA_24
NACHT
DUF5906
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AEB56698
LinkDB
All DBs
Position
720704..722482
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AA seq
592 aa
AA seq
DB search
MKPYVGFFLLSIVGFLIFASTQPMLGYILKYFVDGLSNPEASLFEGVPWLLEHAPWLAHL
KLLQAVPLLIVLIALWQGIGSFLGNYYLAKVSMGLVQDLRIALFNNLLTLPNRYFDNHNS
GHLISRITYNVTMVTGAATDAIKVVVREGMTVIFLFATLLWMNWKLTLVMVAILPVIGLM
VTSTSKKFRKQSKKIQTSMGDVTHVTSESIQGYRVVRSFGGEDYEKQRFLEASEENKLKQ
LKMVKTNAVYTPSLQLVIYSAMAVLMFLVLWLRGDSSAGDLVAYITLAGLLPKPIRQLSE
VSSTIQKGLAGAESIFEQLDESPEVDHGTQERERISGRLEVRDLSFSYPGSEKPVLNDIS
FVAEPGQMVALVGRSGSGKSTLANLIPRFYHHEQGSILLDGLDVEDYTLRNLRRHIALVT
QHVTLFNDTVRNNIAYGDLAGASLEAVQQAAGDAYAAEFIEKMPQGYDTLVGENGVLLSG
GQRQRLAIARALLKDAPLLILDEATSALDTESERHIQAALDQVMQGRTTLVIAHRLTTIE
KADLILVMDQGQIVERGNHAELLAQNGYYARLHAKQFEETSDVSGSEHGALC
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgtatgttggctttttcctgcttagcatcgtcggcttcctgatcttcgcttcc
acccagcctatgctgggctacatcctcaagtacttcgtcgatggactgtccaatcccgag
gccagcctgttcgagggcgttccgtggttgttggagcatgctccctggctggcgcacctg
aagctgctgcaggccgtgccgttgttgatcgtactgatcgctttgtggcaggggattggc
tcgtttctgggcaactattacctggccaaggtctcaatgggactggtgcaggacttgcgc
atcgcgctgttcaacaacctgctgacgctgcccaatcgctatttcgacaaccacaactcc
ggtcacctgatttcacgcatcacctataacgtgaccatggtcacgggtgctgccacggat
gcgatcaaggtggtggttcgtgaagggatgacggtgatcttcctgttcgccaccctgctg
tggatgaactggaagctgacactcgtaatggtggccattttgccggtcatcgggcttatg
gtgaccagcaccagcaagaagtttcgcaagcaaagcaagaaaattcagaccagtatgggg
gacgtcactcatgtgacctcggagagtatccaggggtatcgtgtggtacgtagcttcggc
ggcgaggactacgagaagcagcgctttctcgaggccagcgaagagaacaagctcaagcag
ctgaagatggtcaagaccaacgccgtctataccccgtcgctgcaactggttatttacagt
gccatggcggtgctgatgttcctggtattgtggctgcgcggtgactcgtctgctggtgat
ctggtcgcctatatcaccctggccggcttgctgcccaaacccatccgtcagctgtcggaa
gtcagctccaccatccagaagggcctggccggtgccgagagcattttcgagcagctcgac
gagtctcctgaggtggatcacggcactcaggagcgtgagcgcatcagcggtcgcctcgag
gttcgtgatctgagcttcagctacccaggttcggaaaagcccgtgctgaacgacatctcc
ttcgttgccgagccagggcagatggtggcactggtcggtcgctccggtagcggtaagtcg
acccttgccaacctgatcccgcgtttctatcaccacgaacagggcagcattctgctcgat
ggccttgatgtggaggattacaccctgcgcaacctgcgccgccatatcgcactggtgacc
cagcatgtcacgctgttcaacgacaccgtgcgcaacaacatcgcttatggtgatctggct
ggtgcatcgctagaggccgttcaacaggcggcaggtgacgcttatgcggcggaattcatc
gagaagatgccacaaggctacgacactctagtcggtgaaaatggtgtattgctctccggc
ggccagcgtcagcgccttgccattgcgcgtgcgctgctcaaggatgcgccgctgctgatt
ctcgacgaggccacttcggcgctggataccgagtccgagcggcatatccaggcggcactg
gaccaggtgatgcagggccgtaccacgctggtgatcgcgcaccgcctgaccacgatcgag
aaggccgacctgatcctggtgatggatcaggggcagatagtcgagcgcggcaatcatgcc
gaactgcttgcgcagaacggctactatgcgcggctgcatgccaagcaattcgaagagacc
tccgatgtctctggcagcgagcacggcgccttatgctga
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