KEGG   Pseudomonas mendocina NK-01: MDS_1296
Entry
MDS_1296          CDS       T01473                                 
Name
(GenBank) outer membrane porin
  KO
K18093  imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk01501  beta-Lactam resistance
pmk02020  Two-component system
Module
pmk_M00745  Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MDS_1296
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    MDS_1296
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pmk02000]
    MDS_1296
   01504 Antimicrobial resistance genes [BR:pmk01504]
    MDS_1296
Transporters [BR:pmk02000]
 Other transporters
  Pores ion channels [TC:1]
   MDS_1296
Antimicrobial resistance genes [BR:pmk01504]
 Gene sets
  beta-Lactam resistance modules
   Imipenem resistance, repression of porin OprD [MD:M00745]
    MDS_1296
SSDB
Motif
Pfam: OprD
Other DBs
NCBI-ProteinID: AEB57327
LinkDB
Position
complement(1419302..1420606)
AA seq 434 aa
MQVMKWSVIALAVAAGTSQMAVASSQSESNGFIEDSSFNIFNRVLYMNRDFKNGASNGAS
TSANPAGYREETGLGIRLLYESGFTQGTVGVGFDAHSLSSIKLDSGRGRYGTGQFAQTDE
GRGDDTQTEVGGAVKLRISDTVLKYGSQFTASPVFSTDDSRILPEVTTGTYLVSNEIEGL
ELSAGRFTAMSSQTGTSRDDINGKGEAGLKYANIVGASYSFTDDLSAAFHASDVEDYWKK
YYGNVNYNLSLAEEQALNFDFNVYKTDYDKTYTNTASDEDNTIWSLAVAYSLGAHTFTLA
HQRSSGDRGYEYGVDGGGTVWLANSVQYSDFNGKDERSWQARYDLNMAEYGVPGLSFMTR
YIYGDNIDVAGFAEEGKEHEFNFETKYVVQDGAAKDLSFRVRSAIWRANSAYNSVNGSDN
NDLRLIVEYPLSVL
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgcaagtgatgaagtggagcgtaatcgccctggcagtagccgcgggcaccagccaaatg
gccgtggcgtccagccagtccgagtccaacggctttatcgaagacagcagcttcaacatc
ttcaaccgcgttctgtacatgaaccgcgacttcaagaatggtgcctcgaacggcgcaagc
acctccgccaacccggctggctaccgtgaagaaactggcctgggcatccgcctgctgtac
gaatccggcttcacccaaggtaccgtaggcgtaggtttcgacgctcactcactgagcagc
atcaagcttgacagcggtcgcggccgctacggcactggccagttcgcccagaccgatgaa
ggtcgtggcgacgacacccagaccgaagtcggcggcgctgtaaagctccgtatttccgac
actgttctgaagtatggcagtcagttcaccgccagcccggtattctccaccgacgacagc
cgcatcctgccagaagtcaccacaggtacctatctggtaagtaacgaaattgaaggccta
gaactaagcgccggtcgcttcaccgccatgagcagccagaccggcaccagccgcgacgac
atcaacggcaaaggtgaagctggcctgaagtacgctaacatcgtgggggcttcctactcg
ttcaccgatgacctgagtgcagcattccacgcctccgatgtagaagactactggaagaag
tactacggtaacgtcaactacaacctgtcgctggccgaagagcaggctctgaacttcgat
ttcaacgtctacaagaccgactacgacaagacctacaccaatactgctagcgacgaagac
aacactatctggagtcttgcagttgcctactcgctgggcgcccacactttcaccctggcc
caccaacgctcgagcggtgaccgtggctatgaatacggcgtagacggcggcggtaccgtc
tggctggccaactccgtgcaatactccgacttcaatggcaaggacgaacgctcttggcag
gctcgctacgacctgaacatggccgagtatggcgtaccgggtctgagcttcatgactcgc
tacatctacggtgacaatatcgacgttgcaggttttgctgaggaaggcaaagaacacgag
ttcaacttcgaaactaaatacgtcgttcaggatggcgccgccaaagacctgtcgttccgc
gttcgtagcgccatctggcgtgccaacagtgcatacaactcggtaaacggttcagacaac
aatgacctgcgcctgatcgtcgagtacccgctgagcgttctgtaa

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