Pseudomonas mendocina NK-01: MDS_3095
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Entry
MDS_3095 CDS
T01473
Name
(GenBank) aromatic hydrocarbon degradation membrane protein
KO
K06076
long-chain fatty acid transport protein
Organism
pmk
Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_3095
Transporters [BR:
pmk02000
]
Other transporters
Pores ion channels [TC:
1
]
MDS_3095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
OMP_b-brl
DUF2490
TonB_dep_Rec
BBP2
Porin_2
YadA_anchor
Autotransporter
TraF_2
OprB
DUF5777
Motif
Other DBs
NCBI-ProteinID:
AEB59126
LinkDB
All DBs
Position
3419172..3420434
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AA seq
420 aa
AA seq
DB search
MSKRLLKTGLAVAITATSSYGFASGFALNEQSISGMGTSFAGRSSSADDASTVFGNPAGM
ARLKRDEVYVGAAAIYAKSDISHATANSAFGPVAGSNDGDMVPVTGVPMGYYVKPLDDKV
AFGLGIYVPFGLMTDYESGYQGRYYADKSYVRVITVQPTLSYRFNDKLSVGFGPTFNHIE
GELSSSLNAGTEDGKVKVKGDDTAVGFNVGVLYEFTPQTRLGMTYHSRVKYELEGDTQVR
VGGALAGLAGKYDASLDLTTPESVDLSLTHELDDRWTLYLGSTWTRWSRFKEIRIENETS
TLPPPLATIVEEQNWHDTWAHAIGLSYKLNPQWTLRTGVAVDQSPTNNVDRSPRVPSGDR
TIFSVGAGWSPNQDMTIDLAYSYLQEESVDVNHASATRGTYRARYKNSAHGLGASLSYRF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacgccttctcaagaccggtctggccgtcgccatcaccgccacatccagctat
ggcttcgccagtggcttcgccctcaacgagcagagcatttccggcatgggcacctccttc
gccggtcgctcttcgtccgccgacgacgccagcacagtgtttggcaaccccgcaggcatg
gcccgtctcaagcgcgatgaggtctatgtcggtgccgcggccatttatgccaagagcgat
atcagccatgccacggccaactctgccttcggccccgtggccggtagcaatgacggcgac
atggtgcccgttaccggtgttcccatggggtactacgtcaagccgctggacgacaaggtc
gccttcggcctcggcatttacgtaccgttcggcctgatgaccgactacgaaagcggctac
caaggccgctactacgccgacaagagctacgtgcgtgtcattactgtgcaaccgacgctc
agctatcgcttcaacgacaagctgtcggtaggcttcggtcccaccttcaaccatatcgag
ggtgagctttcctcttcgctcaatgccggcacagaggacggtaaggtgaaggttaaaggc
gatgatacggcggtcggtttcaatgtcggcgtgctgtacgaattcactccgcaaacccgt
ctaggtatgacctaccattcacgcgtgaagtacgagctcgagggcgatacccaggtacgg
gtcggtggtgcactggcaggcctggccggtaagtacgatgcctcgctcgaccttaccact
cccgaatcagttgacctttcgttaacccacgaacttgatgatcgctggaccttgtacctc
ggcagtacttggacacgctggagtcgcttcaaggaaatccgtatcgaaaacgaaacctct
acgctgccgccaccactggctaccatcgtcgaggaacagaactggcacgacacctgggcc
catgcgatcggtctgtcgtacaagctcaatccgcagtggacgctgcgtaccggtgtcgcc
gtcgaccagtcgccaaccaacaacgtcgaccgctcgccgcgcgtgccctccggcgaccgc
accatcttcagcgttggtgccggctggagcccgaatcaggacatgaccatcgacctggcg
tactcctacctgcaggaggaatcggtggacgtcaaccacgccagcgctacccgtggcacc
taccgcgcacgctacaagaacagcgcgcacggcctgggggcctcgctcagctaccgcttc
taa
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