Pseudomonas soli: O165_015225
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Entry
O165_015225 CDS
T03276
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pmos
Pseudomonas soli
Pathway
pmos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O165_015225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_015225
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O165_015225
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O165_015225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIN59557
UniProt:
A0A1H9TSY0
LinkDB
All DBs
Position
complement(3208717..3210732)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIDAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTM
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLVEAVDGIKEELKQRLEYLHASNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPDDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIGKRVALGERVLATTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNITGSMQRAIDETERRREKQVAFNQANGIVPKGVVKDITDILEGATV
PGARSKKRKGMAKAAEEAGRYEVELQTPAQITKRIKQLEEKMFQFARDLEFEAAAQLRDE
IGQLRERLIAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgcttccagccggccggcgatcagcccgaggccatc
cgccagatggtcgagggtatcgacgccggcctttcgcaccagaccctgctcggggtgacc
ggctcgggcaagaccttcagcatcgccaacgtcatccagcaggtgcagcgcccgaccatg
gtgctcgcgccgaacaagaccctggccgcccagctgtacggcgagttcaaggcattcttc
ccgaacaacgccgtcgagtatttcgtttcctattacgactactatcagccggaagcctat
gttccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccatatcgaacag
atgcgcctgtcggcgaccaaggcgctgctggaacgacgcgacgcgatcatcgtcaccacc
gtgtcgtgcatctacggcctgggcagccccgagacgtacctgaagatggtcctgcacgtc
gatcgtggcgacaagctcgaccagcgcgccctgttgcgccgcctggccgacctgcaatac
acccgcaacgagatggatttcgcccgcgccaccttccgcgtgcgcggcgacgtgatcgac
atcttcccggccgaatcagacctcgaggccatccgcatcgagctgttcgacgacgaagtg
gagaacatcgccgctttcgacccgctcaccggcgaggtcatccgcaagctgccgcgtttc
accttctaccccaagagtcactacgtgaccccgcgggaaaccctggtcgaggcagtggac
ggaatcaaggaagagctcaagcagcgcctcgagtacctgcacgcgagcaacaagctggtc
gaggcccagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgaactgggc
tactgcaacggcatcgagaactactcgcgctacctctccggccgcccggccggcgcgccg
ccgcccacgctctacgattacctgccggatgacgcgctgctggtgatcgacgaatcacac
gtcagcgttccgcaggtcggcgccatgtacaagggcgaccgctcacgcaaggaaaccctg
gtggagtatggcttccgcctgccgtcggcactcgacaaccgtcccatgcgtttcgatgaa
tgggaggcggtcagcccgcagaccatcttcgtctccgccacccctggcccctacgaggcc
gagcatgccgggcgggtggttgagcaggtggtgcggccgaccggcctggtcgacccgcag
gtcgaggtgcgtccggcactgacccaggtcgacgacttgctgtcggagatcggcaagcgc
gtcgccctgggcgagcgcgtgctggccaccacgctgaccaagcgcatggccgaggacctc
accgattacctggccgatcacgatgtgcgggtgcgctacctgcactcggacatcgacacc
gtcgagcgggtcgagatcatccgcgacctgcgcctcggcactttcgacgtgctggtgggg
atcaacctgctgcgcgagggtctggacatgcccgaggtgtcgctggtcgcgatccttgac
gccgacaaggagggcttcctgcgttcggagcgctcgctgatccagaccatcggccgtgcc
gcacgtaacctcaacggtagggcgatcctctacgccgacaacatcaccggctccatgcag
cgagccatcgatgagaccgagcggcgccgcgagaagcaggtcgctttcaaccaggccaac
ggcatcgtgcccaagggcgtggtcaaggacatcaccgacatcctcgaaggcgccaccgtg
cctggagcccgcagcaagaagcgcaagggcatggccaaggcggcggaggaggccgggcgt
tacgaggtcgagctgcagaccccggcgcagatcaccaagcgcatcaagcaactggaagag
aagatgttccagttcgcccgcgacctggagttcgaagcggcggcgcaattgcgcgacgag
atcggacagttgcgcgagcggctgatcgccagctga
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integrated database retrieval system
