Proteus mirabilis HI4320: PMI1311
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Entry
PMI1311 CDS
T00753
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmr
Proteus mirabilis HI4320
Brite
KEGG Orthology (KO) [BR:
pmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmr03016
]
PMI1311 (rnb)
Enzymes [BR:
pmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PMI1311 (rnb)
Transfer RNA biogenesis [BR:
pmr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PMI1311 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
ODP
Motif
Other DBs
NCBI-ProteinID:
CAR42782
UniProt:
B4EW02
LinkDB
All DBs
Position
1385905..1387848
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQQLHAQTPRVEGLVKGTDKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IAAVHTNNDKESAEPEELVEPFLTRFVGRVQKKEGDNRLWIIPDHPLLKDAIPCRPIKSL
THPFADQDWAVAEMRRHPLKGDKHFQAELTDFITDKDDHFAPWWVTLMRHQLERNAPEVD
SETLTLHDDLPREDLTALSFVTIDSASTEDMDDALYIRKEENGQLSLYIAIADPTAYIQP
NSELDTIAAQRALTNYLPGFNIPMLPRELSDNLCSLRPNEKRPALVCQVGIMEDGALTDE
IHFYSAWVESKAKLVYDNISDWLEGEETQWAPENEIVHEQVMLLKEMSEKRHVWREQHAL
VFKERPDYRFILDDSGNVLDIVAEKRRTANRIVEEAMITANICAAKVLSRNLGFGIYNVH
TGFDPLYIDQVSQTLKEHGIETNADELLTLEGFCRLRRELDNQPNQFLDSRIRRFQNFAE
IKTEPGPHFGLGLEAYATWTSPIRKYSDILNHRLLKAIISKSAAEKPQDEDCVRIAERRR
ANRMAERDVGDWLYARFLKPFAGTESTFNAEIIDITRGGIRVRLVENGAIAFIPAPFLHA
VRDEIQCSQETGSVIIKGETAYKLNDIIPVRIEDVKLETRNIVARPI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccgctgcttgctcagctaaaacagcaactccatgcccaaacaccg
cgcgtggaaggccttgtaaaagggacagataaaggctttggcttccttgaagttgatggt
cagaaaagctattttatccctcctcctcaaatgaaaaaagtgatgcacggtgatcgcatt
attgctgccgtacatactaataatgataaagagtccgctgagcctgaagagctggtagaa
ccctttttgactcgctttgtcggccgtgttcagaaaaaagaaggtgataatcgtctatgg
attattcctgatcaccctctactcaaagatgccattccttgtcgtcctataaaaagctta
acgcatccatttgccgatcaagattgggcagtggcggaaatgcgccgacatcctcttaaa
ggtgataaacattttcaagctgaattaactgattttattaccgataaagatgaccatttt
gcaccttggtgggtgacattaatgcgtcatcaattagagcgaaatgcacctgaagtagac
agtgaaacattaaccttacatgatgatctaccgcgtgaagatttaaccgcgctctccttt
gtgaccatcgatagtgcttcaaccgaagatatggacgatgcgttatatattcgtaaagaa
gaaaatggccaactttcactgtatatcgctattgccgatccaacggcttatattcagcct
aatagtgaattagataccattgcagcacaacgagcgctaacaaactatctaccgggcttt
aatatcccgatgttacctcgtgagctatcagataatctctgctcattgcgccctaatgaa
aaacgtcctgcgttagtctgccaagtgggtatcatggaggatggtgcattaaccgatgag
atccacttctactcagcatgggtagaatcaaaagcaaaactggtttatgacaatatttct
gattggctagaaggtgaagaaacacagtgggcacctgaaaatgagattgttcatgaacaa
gtcatgctattaaaagagatgagcgagaaacgtcatgtatggcgtgaacaacatgctctc
gtctttaaagagcgtcctgactatcgctttattcttgatgacagtggcaacgtattagat
atcgtggcggaaaaacgtcgtactgccaaccgtatcgtggaagaagcgatgatcaccgcc
aatatttgtgcggcaaaggtacttagtcgcaatctcggttttggtatttataacgttcat
actggttttgatccgctctatattgatcaagtctcacaaaccttaaaagagcacggtatt
gaaaccaacgcagatgagttattaacccttgaaggtttctgtcgcttacgtcgtgaactg
gataatcagccaaaccaattccttgatagccgtattcgtcgtttccaaaacttcgctgaa
ataaaaacagagccaggtcctcactttggtttaggccttgaagcttatgcgacatggaca
tcaccgatccgtaaatacagtgatattttaaatcaccgtttattaaaagcgattatcagc
aaaagtgcggcagaaaaaccgcaagatgaagattgtgttcgtattgccgaacgtcgtcgt
gctaaccgtatggccgagcgcgatgtcggtgattggttatatgcgcgcttcttaaaacct
tttgctggcactgagagtacctttaatgccgaaattattgatattactcgtggtggtatt
cgggtacgtttagttgaaaatggggctattgcctttattcctgcaccatttttacatgcg
gtacgtgacgaaattcaatgtagtcaagaaactggctctgtcattattaaaggtgaaaca
gcctataagctcaacgacattattccggtacgtattgaagatgtgaaactagaaacgcgt
aatattgttgctcgtccgatttaa
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