Paenibacillus mucilaginosus KNP414: KNP414_05676
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Entry
KNP414_05676 CDS
T01550
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms03420
Nucleotide excision repair
pms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KNP414_05676
03430 Mismatch repair
KNP414_05676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pms03400
]
KNP414_05676
Enzymes [BR:
pms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KNP414_05676
DNA repair and recombination proteins [BR:
pms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KNP414_05676
MMR (mismatch excision repair)
Other MMR factors
KNP414_05676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
AAA_16
PhoH
SLFN-g3_helicase
Leuk-A4-hydro_C
NACHT
AAA_30
DEAD
nSTAND3
PTPA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEI44200
UniProt:
F8FMM9
LinkDB
All DBs
Position
complement(6274257..6276632)
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AA seq
791 aa
AA seq
DB search
MTIGREERVQEQQRLEAVLGEIRGRLEKLQEEAGGFKEDIVEIRKHFWDDVTINLDGAEE
VYETFASLKQQAEVLSERERGHRRMQAQVRLLRRLQESAYFGRIDFREEGRDGTAEAVYI
GTGSLLDDEGLAFLIYDWRAPVASMYYDHGPGPAAYVTPGGEIRGELERKRQYIIRDGQL
RAVFDTGLTIGDELLQHVLGGASDSRMKSIVATIQREQNRIIRSEQSRLLLVEGAAGSGK
TSAALQRIAYLLYRYRESLRADQIVLFSPNGMFSAYVSSVLPELGEDNMQQTTFQEYLDY
RLAEDFRVEDLLDSLEYVYGESEGETEELRLSGIAVKSQASFLEALQQYTDFLGREGGMK
WRPLTFRDTVIVSGEEIDTRFKALDPCQSIAGRLEQLAKELVQSAEAYMRSQLYADWVEE
EMQTLDVEAYLKAYSRLQQRKRFSEETFDDFDREYEELAKALLQEYVTPLKRWIRRLKFL
DTQGMYMALHADPLLRRAHLDPLAGNPAEVDGWCAYTVRRLEKGELPYEDAAPYLIFKES
MEGFRMNLSVRHVFVDEAQDYTPLQWAYLRRLFPRSRWTVLGDPLQGIGAHLLGVREMNH
PAVLAAPAETERIRLTRTYRSTRPIVEFTRTLLPGAEIEPFDREGPKPTLTVTGRESLAE
EIRRRTEQVREAGHRTIAILCKNERESLEAYERLRDVMEVKRIGRHGGSFEPGVLVLPAY
LAKGVEFDAVLMYDVSQERYGGERERKLLYTACTRAMHELHLFSCGEPSQLLQEAPSETY
RVRNPLDNRYQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcggcagagaagaacgggtgcaggagcagcagcggctggaggctgtgctgggg
gagatccgcggcaggctggagaagctgcaggaagaagcgggcgggttcaaggaagatatc
gtcgagatccgaaagcacttctgggatgatgtcacgatcaatctcgacggggcggaagaa
gtgtatgaaacgttcgccagtctgaaacagcaggcggaggtgctctcggagcgggagcgg
ggccaccggcgcatgcaggcgcaggtacggctgctgagacgtctgcaggagtcggcttat
tttggccggatcgacttccgcgaagagggcagggacggtacggcggaagcggtctatatc
ggcacgggctcgctgctggacgatgaagggctcgctttcctaatctacgactggcgggcg
cccgtcgcctccatgtattacgatcacggccccggccccgccgcctatgtgacgccgggc
ggtgagatccggggagagctcgagcgcaaacggcagtacatcatccgggacgggcagctc
cgggccgtcttcgatacgggcctcacgatcggcgatgagctgctgcagcatgtgctgggc
ggcgcttccgactcgcggatgaagagcatcgtcgccacgatccagcgggagcagaaccgc
atcatccgcagcgaacaaagccggctgctcctcgtggaaggagcagccggcagcggcaaa
acgtcggcggccctgcagcggatcgcctacctgctctaccggtaccgcgaatcgctgcgg
gccgaccagattgtgcttttctccccgaacgggatgttctccgcgtacgtgtcgtcggtg
ctgcccgagctcggggaagacaacatgcagcagacgaccttccaggaatacctggactac
cgtcttgcggaggacttccgtgtggaagacctgctcgattccctggagtacgtctacggt
gagtccgagggggagacggaagaactgcggttatccgggattgccgtgaagtcgcaggcc
tccttcctggaggctcttcagcagtatacggacttcctcggccgcgaggggggcatgaag
tggcggccgctgacattccgcgataccgtgatcgtgagcggggaggagatcgatacgcgg
ttcaaggcgctggacccgtgccagtcgattgcgggccgacttgagcagctcgcgaaggag
cttgtccagtcggcggaggcctacatgcgcagccagctttatgcggactgggtggaggaa
gagatgcagacgctggatgtggaggcctacttgaaggcgtacagccggctgcagcagcgc
aaacggttctcggaggagacgttcgatgattttgaccgggaatatgaagagcttgcgaag
gctctgctgcaggaatatgtaacgccgctcaaaaggtggatccgcaggctgaagttcctc
gatacacaggggatgtacatggctctgcatgccgacccgctcctccgccgtgcccatctg
gatccgctcgccgggaatccggcggaggttgacgggtggtgcgcttatacggtccgccgg
ctggagaaaggggagctgccctatgaggatgcggccccgtacctgatcttcaaggaatcg
atggagggcttccgtatgaacttgtcggtccgtcatgtgttcgtggatgaggcgcaggat
tacacgccgctgcagtgggcctatctgcgccgcctgttcccgcgcagccggtggacggtg
ctcggtgatccgcttcaggggatcggagcccacctcctgggcgtgcgggagatgaatcac
cccgctgtgctggcggcccctgccgaaacggagcgcatccggcttacccggacctaccgt
tcgacccggccgatcgtggagttcacccggacgctgcttccgggcgcggagatcgagccc
ttcgaccgggaagggccgaagccaaccttgacggtgaccggcagggagagccttgccgaa
gagatccggcggagaacggagcaggtccgggaggccggacaccggacgatcgccatcctg
tgcaagaatgagcgggagagcctcgaggcttacgagcggctccgcgatgtcatggaagtg
aagcggatcggtcggcacgggggttcctttgagcccggcgtgctggtgcttcccgcctac
ttggcgaaaggtgtggaattcgatgccgtgctgatgtatgacgtatcgcaggagcggtat
ggcggggaacgggagcgcaagctcctctatacggcctgcacgcgggcgatgcatgagctg
cacttgttcagctgcggggagccgagccagctgctgcaggaggccccttccgagacctat
agggtacgaaacccccttgacaatcgctatcaataa
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