Prochlorococcus marinus MIT 9313: PMT_1353
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Entry
PMT_1353 CDS
T00143
Name
(GenBank) Prokaryotic DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmt
Prochlorococcus marinus MIT 9313
Brite
KEGG Orthology (KO) [BR:
pmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmt03032
]
PMT_1353
03400 DNA repair and recombination proteins [BR:
pmt03400
]
PMT_1353
Enzymes [BR:
pmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PMT_1353
DNA replication proteins [BR:
pmt03032
]
Prokaryotic type
DNA Topoisomerases
PMT_1353
DNA repair and recombination proteins [BR:
pmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PMT_1353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF6325
MAJIN
Wtap
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAE21528
CyanoBase:
PMT1353
UniProt:
Q7V627
LinkDB
All DBs
Position
complement(1436859..1439609)
Genome browser
AA seq
916 aa
AA seq
DB search
MQLACRCDKDWNGYISSVANTLVIVESPTKARTIRGFLPKDFRVEASMGHVRDLPNNASE
IPAAQKGQKWANLGVNTTADFEPLYVVPKDKKKVVKELKAALKEADQLLLATDEDREGES
ISWHLLQLLAPKVPVKRMVFHEITKEAIAKALDQPRDLDMELVHAQETRRILDRLVGYTL
SPLLWKKVAWGLSAGRVQSVAVRLLVQRERARRAFRSGSYWDLKAKLDKGGGQFEARLTS
LAGQKIATGSDFDETTGALKAGRNVRLLGESDARTLSESVRSSQWRVEAVEEKPTVRKPV
PPFTTSTLQQEANRKLRFSARETMRCAQGLYERGFITYMRTDSVHLSDQAIQAARSCVGS
RYGDDYLSKTPRQFSTKSRNAQEAHEAIRPAGESFRSPSGSGLEGRDMALYELIWKRTVA
SQMAEARLTMLAVDLRVADAKFRATGKRIDFPGFFRAYVEGSDDPDAALEGQEVLLPDLA
VDDSPTLQDVEALGHQTQPPARYSEASLVKMLEKEGIGRPSTYASIIGTIVDRGYAALQN
NSLTPSFTAFAVTALLEEHFPDLVDTSFTARMEFTLDEISTGKVQWLPYLEGFYKGEQGL
ESQVQQREGDIDSSVSRTVDLEGLPCVVRIGRFGAYLEAKRVGDDGEEESLKATLPQEIT
PADLDAEKAELILKQKADGPESIGEDPETGDQVYLLFGQYGPYVQRGQVGEDNPKPKRAS
LPKGKKPDELSLDEALGLLRLPRLLGEHPDGGRIQAGLGRFGPYVVWDKSKGEKDYRSLK
GEDDVLAVGLSRALELLAMPKRGRGGRTALKDLGIPEGSEEKVQVFDGPYGLYVKQGKLN
ASLPEGKGVDDISLDVAVELLAAKALSKKTSRRKKSTSTTSKKTAASKPKTRKPPATTKT
GRLRASAVRVIKPGEV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgcttgtcggtgcgataaagattggaacggttacatctcgtctgtggcgaac
actctggtcattgtcgaaagccctaccaaggcgagaaccattcgagggtttctgcccaag
gacttccgtgtggaggcctccatgggccatgtgcgcgacttgcctaacaacgccagtgag
atccctgcggcccaaaaggggcagaaatgggccaaccttggcgtgaacaccaccgcggat
ttcgaacctctttatgtggttcctaaggacaaaaagaaggtggtcaaggagctgaaggca
gctttgaaggaggctgatcagctgttgttggcaactgacgaagatcgagagggcgaaagc
atcagttggcatttgctgcagctgttggctcccaaagtgcctgtcaagcggatggtgttt
cacgagatcaccaaagaagccattgcgaaggctcttgatcagcccagagatctcgacatg
gagctggtacatgcccaggagacgcgacggattcttgaccgtttggtgggctacacgctt
tcgcctctgttgtggaagaaggtggcatggggactctccgccggtcgggtgcagtccgta
gcagtgcggttgcttgtgcagcgtgaacgtgcccgtagggctttccgtagcggcagctac
tgggacctaaaggccaaacttgataagggtggtggtcaatttgaggcaaggctcaccagt
ctggctggccagaagatcgctaccggcagtgatttcgatgaaacgacaggtgctttaaag
gctggcagaaatgttcgtctgcttggcgaatcagatgcgcgcactctttccgagtccgtt
cgaagcagtcagtggcgggttgaggcggtggaagagaagccaacggtacgtaaaccggtg
cctcctttcacgacaagcactttgcagcaggaggcaaatcgcaagttgcggttttcggcc
agggaaacgatgcggtgtgcccaggggctgtatgagcgtggcttcatcacctatatgcga
actgactctgtgcatctatccgatcaggctattcaggctgctcggagctgcgtggggtca
cgttatggcgacgattatctgagcaaaactccacgtcagttcagcactaagtcacgcaat
gcccaggaggctcacgaagcgatacgaccagcgggtgaaagcttccgttccccaagtgga
tctggacttgaagggcgcgacatggccctatatgagttgatttggaagcgaacagtggcc
agccagatggccgaggctcgactcaccatgctggcggttgatcttcgtgtggctgatgcc
aaatttcgggccacgggtaagcgcattgatttcccaggtttctttcgcgcttacgtggag
ggcagtgatgatccagacgctgccttggaaggccaggaagttttgctgcctgatttagct
gtcgacgattcgcccacgctgcaggatgtggaggccctcggtcaccagactcagccgccg
gctcgctatagcgaggcttcactggtgaagatgctcgagaaggagggcattggcaggcct
tcaacctacgccagcatcatcggcaccatcgttgatcggggttatgcagcattgcaaaac
aactcccttactcccagtttcactgcttttgctgtaaccgctcttctagaggagcatttc
cccgatcttgtcgataccagctttacggctcggatggaattcacgcttgatgagatttcc
acgggcaaggtgcagtggttgccttatctcgaagggttctacaagggcgaacagggcctt
gagagtcaggttcagcagcgtgaaggtgacatcgactccagtgtgtctcgcactgtggat
ctggagggattgccctgtgtggtgcgcatcggtcgttttggggcctatctggaagccaaa
cgagtgggtgatgacggcgaggaggaatcgcttaaggccaccctccctcaagagatcacc
cctgcagatcttgatgcagagaaagccgagctgattctcaagcagaaagctgatggcccg
gaatcgattggggaagacccggaaacaggtgatcaggtttacctcctttttggtcagtac
gggccttatgtgcagcgaggccaggtgggtgaggacaaccccaagccgaagcgggcatcc
ttgcccaaaggcaagaagcctgatgagctcagccttgatgaggcactgggcttactgcgt
ctgccgcgcttactgggagagcatcccgatggtggacgcattcaggcgggtttgggtcgc
ttcggaccctatgtggtctgggataagagcaagggagagaaggactatcgctcccttaag
ggggaggatgacgtgttggcagtggggctgagccgtgcactagagcttttggcgatgccc
aagcggggcaggggcggccggactgcgttgaaagaccttggcatcccggagggcagtgag
gagaaggtacaggtttttgacggtccctatggcttgtatgtcaagcagggcaagctcaat
gcctcgttacctgaagggaagggtgtcgacgacatttctcttgatgtagcagtggagcta
ttggctgccaaggctttaagtaagaagacaagtcgacgcaaaaagagcacttcaacaacc
agcaaaaaaaccgccgcaagtaaaccaaaaactcgtaaacctcctgctactacaaagaca
ggtcggttgcgagccagtgctgttcgggtcatcaagcctggtgaggtttga
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