KEGG   Pasteurella multocida subsp. multocida Pm70: PM1736
Entry
PM1736            CDS       T00046                                 
Symbol
rpoC
Name
(GenBank) RpoC
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
pmu  Pasteurella multocida subsp. multocida Pm70
Pathway
pmu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PM1736 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmu03021]
    PM1736 (rpoC)
   03400 DNA repair and recombination proteins [BR:pmu03400]
    PM1736 (rpoC)
Enzymes [BR:pmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PM1736 (rpoC)
Transcription machinery [BR:pmu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PM1736 (rpoC)
DNA repair and recombination proteins [BR:pmu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PM1736 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C
Other DBs
NCBI-ProteinID: AAK03820
UniProt: Q9CK92
LinkDB
Position
complement(1952228..1956481)
AA seq 1417 aa
MKDLVKFLKAQSKTSEDFDVIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFESYIVIEPGMTDLDKGQLLTEEQYIDAEDRWGDEFDAK
MGAEAIQALLRDMDLPQECENLREELQETNSETKRKKITKRLKLLEAFIQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYAKLESRGFASTIKAAKKMVEREDAIVWDILADVIREH
PILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDKVNGKGEGMLLQDPREAEKAYRT
GQVELHSRVKVRITEYVKNAVGEFEPQTNLVDTTIGRAILWMIAPKGMPFSLFNQTLGKK
AISKLINESYRRLGMKPSVLFADQIMYTGFAYAARSGSSVGIDDMVIPAKKYEIISAAED
EVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGQPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTEEVLIARNTLLDEKLCDVIDSNSVDSIKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNTGTLR
LANVKFVTNNEGKLVLTSRNTELTIIDAFGRTKEHYKVPYGAILSKGDGQEVTAGETVAN
WDPHTMPVVSEVSGFVKFIDLIDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPAIK
LVDAKGNDILIPGTDVVAQYFLPGKAIVTLDDNAEVHIGEPLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLLITPAEGETYEEMIPKWRQLNVFE
GEMVERGDLISDGAETPHDILRLRGVHAVTEYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKGIVTKAYDSEFLEGEQVEVARVKIVNRKREAEGKPLVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQNRQKKVVMSDEMP
VKLSAADEEEIAAEFTVTAEDATASLAEMLNMADDAE
NT seq 4254 nt   +upstreamnt  +downstreamnt
gtgaaagacttagttaagtttttaaaagcacaatcaaaaacaagtgaagattttgatgtg
atcaaaattggtttagcctcaccggacatgatccgttcttggtcatttggtgaagttaaa
aaacctgaaaccattaactaccgcacctttaaaccagagcgtgacggtcttttctgtgca
cgtattttcggaccagtaaaagattacgaatgtttatgtggtaaatacaaacgcttaaaa
caccgtggtgtgatctgtgaaaaatgtggtgtggaagtcactcaaaccaaagtacgtcgt
gagcgtatgggtcacattgaacttgcctcacccgtggcgcacatttggttcttaaaatca
ctgccgtcccgtatcggtttattacttgatatgccattacgtgatatcgaacgcgtttta
tatttcgaatcttatattgtgatcgagccgggaatgacggatctcgataaaggtcagtta
ttaaccgaagaacaatatatcgatgcggaagatcgttggggcgatgaatttgacgcgaaa
atgggggcggaagctatccaagccttattgcgcgatatggatttaccgcaagaatgtgaa
aacttacgtgaagaattacaagaaacgaactcagaaaccaaacgtaagaaaatcaccaaa
cgtttaaaactgttagaagcctttattcaatcgggtaacaagcctgaatggatggtaatg
accgtattaccagtattaccaccagatttacgtccattagtgccactcgatggtggtcgt
tttgcgacctcagatttgaacgatttataccgtcgtgtgatcaaccgtaacaaccgttta
aaacgtcttttagacttaatcgcaccagatatcatcgtgcgtaacgaaaaacgtatgtta
caagaatcagtagatgcgttattagataacggtcgtcgtggtcgtgctattactggctct
aaccgtcgtccattaaaatcacttgcggatatgatcaaaggtaaacaaggtcgtttccgt
caaaacctattaggtaaacgtgttgactattcaggtcgttcggtaatcaccgtaggacca
tatttgcacctacatcaatgtggtttaccgaaaaaaatggcattggaattattccgtccg
tttatctatgcaaaattagaaagccgtggcttcgcttcaactattaaagccgcgaagaaa
atggttgagcgtgaagatgcgatcgtatgggatatcttagcggacgtaattcgcgagcac
ccaattttattaaaccgtgcaccaacgttgcaccgtttgggtatccaagcctttgaacct
ttattgatcgaaggtaaagcgatccagttacacccacttgtttgtgcggcgttcaacgcg
gacttcgacggtgaccaaatggcggttcacgtgccattgacattagaagcacagttagaa
gcgcgtgcattaatgatgtcaaccaacaacattttatcacctgcaaacggtgagccgatt
atcgttccttcacaagacgtggtattaggtctttactatatgacccgtgataaagtgaac
ggtaaaggtgaaggcatgttgttacaagacccacgtgaagcggaaaaagcgtatcgcacc
ggtcaagtcgaattacattctcgtgtcaaagtgcgtatcacagaatacgtgaaaaatgcg
gtaggcgagtttgagccacaaactaacttagtggatacgaccattggtcgtgcgattctt
tggatgatcgcaccaaaaggaatgccatttagcttatttaaccaaaccttaggtaaaaag
gcgatttctaagttaatcaacgagagctatcgtcgcttagggatgaaaccaagcgtcttg
tttgcggaccaaatcatgtacaccggttttgcgtatgcggcacgttctggttcttctgta
ggtatcgatgacatggtcattcctgccaagaaatacgaaattatttctgcagcagaagac
gaagtagcggaaatccaagagcagttccaatcaggtttagtgacagcgggcgaacgttat
aacaaagtgatcgatatttgggcggcagcaaacgaacgtgttgcgaaagccatgatggaa
aacctatcgactgaagaagtgatcaaccgtgaaggtcaaccagagaaacaagcctctttc
aacagtatctttatgatggcggactcgggtgcgcgtggttctgcggcacagattcgtcag
ttagcgggtatgcgtggtttgatggcgcgtccagatggttcgatcattgaaacaccaatt
accgcaaacttccgtgaaggtctaaacgtattacagtactttatttcaacccacggtgcg
cgtaaaggtcttgcggatacggcattaaaaacagcgaactccggttacttaacccgtcgt
ttagtggacgtggcacaagatttagtgatcatcgaagatgactgtggtacacacgaaggt
atcgtgatgaccccattaatcgaaggtggtgatgtgaaagaagcactacgtgatcgtgta
ttaggtcgtgtggtggcagaagacgtgttgaaaccaggcacagaagaagtgttgattgca
cgcaataccttattagatgagaaattgtgtgatgtgatcgacagtaattctgtggatagc
atcaaagtgcgctccgttgtaacctgtaacacagacttcggtgtgtgtgccaaatgttat
ggacgtgatcttgcacgtggtcacttaatcaaccaaggtgaagccgtgggtgttattgcg
gcacaatctatcggtgaaccgggtacacagttaacgatgcgtacgttccatatcggtggt
gcggcgtctgcagcagcgaaagaatccagtatccaagtgaaaaacacgggtaccttacgt
ttagccaacgtgaaatttgtcaccaataacgaaggtaagttagtgttaacatcacgtaac
accgaattaaccattattgatgcctttggtcgtacaaaagagcactataaagtgccttac
ggtgcgattttaagcaaaggtgatgggcaagaggtgacagccggtgaaaccgtagcaaac
tgggatccacatactatgccagtggtgtctgaggtaagtggttttgtgaaattcattgac
cttattgacggtttaaccgtgacacgtcaaactgatgagttgactggtttatcttctatc
gtggtacaagatgtgggtgaacgtgcgacagcaggtaaagacttacgtccagctatcaaa
ttagtggatgcgaaaggtaatgatatcttaattccagggacagacgtggtagcacagtac
ttcttaccaggtaaagcgatcgtgaccttagacgacaatgcggaagttcatatcggtgaa
ccattagcacgtattccacaagaatcggtaggaacgaaagatattaccggtggtcttcca
cgcgtagcagacttatttgaagcacgtaaaccgaaagagccagccattttggcggaaatt
tcaggtatcgtgtccttcggtaaagaaaccaaaggtaaacgtcgcttattgatcaccccg
gctgaaggtgaaacttacgaagaaatgattccaaaatggcgtcagctcaacgtatttgaa
ggcgaaatggtggagcgtggtgacttgatctcggatggtgcagaaaccccacatgatatc
ttacgcttacgtggcgttcacgcagtcacagaatatatcgttaacgaagtacaagaagtt
taccgcttacaaggggtaaaaattaacgataaacacatcgaagtgatcgttcgccaaatg
ttacgtaaaggtattgtcacgaaagcttatgactctgaattcttagagggtgagcaagtc
gaagtggcacgcgtgaaaattgtgaaccgtaagcgtgaagctgaaggtaaaccattagtt
gaatttgaacgtgaattgcttggtattactaaagcgtctcttgcaactgagtcatttatc
tcagcagcatcgttccaagaaaccacacgtgtgttaaccgaagccgcagtggcaggtaaa
cgtgatgaattacgtggcttgaaagagaacgtaattgtgggtcgtttaatcccagcgggt
accggttttgcttaccaccaaaatcgtcagaagaaagtggtgatgagtgatgaaatgcca
gtgaaattatctgccgcagatgaagaagaaatcgcagcagaatttacggtgactgcagaa
gacgccacagcaagtttagcagaaatgttaaatatggctgatgatgcagaataa

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