Prunus mume (Japanese apricot): 103329235
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Entry
103329235 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103329235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103329235
03036 Chromosome and associated proteins [BR:
pmum03036
]
103329235
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103329235
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103329235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
103329235
NCBI-ProteinID:
XP_008229892
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Position
LG4:complement(16981768..16988595)
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AA seq
1320 aa
AA seq
DB search
MFSPGTKRLNVNPRRDPGSPATPLVENRRSVSDNPVPNRPSTGTPAPWAPRLSVLARVLP
ANQSEKGDEIKPVYVGEFPQVVRDEQASMVQKHVHGDAYVSGGMERGTSLAWIICGNRLF
VWSYLSPAASINCIVLEIPANVFEGGDVGRSGGNCWLLCVVNWDSTSTRTKKVVKHCSSA
GIVLCNKKTQAAVYWPDIYAEGRTAPVVSVASSDELETNSSPIDRKTTPKRQQLNMRHRS
SLTGFCTFNSLIASAVPDSQNMCVALACSSDGELWQFHCSPSGVSRKKVYRDNQTLSSQG
GDNGQNLGSKGYPRSLTWCFPSLPMQESNRQFVLLTDHHIQCFNVELCAEFAVSKLWSHE
IIGSDGDLGIKKDLAGQKQIWPLDMQVDYHGKVTTILVATFCVDRSSSSNYTQYSLLTMQ
YKSGMSVEPTHERVLEKKAPVQVIIPKARVEGEDFLFSMRLRVGGKPSGSAIILSGDGTA
TVSHYFRNSTRLYKFDLPYDAGKVLDASILPSTDDAEEGAWVVLTEKAGIWAIPEKAVIL
GGVEPPERSLSRKGSSNEGSAQEERKNLTFGGNFAPRRASSEAWDAGDRQRAMTVSARQT
AQDEESETLLSQLFHDYLLSGQVDASFERLKNSGAFDRDRETNVFARMSRSIVDTLAKHW
TTTRGAEILAMAVVSSQLMDKQQKHTKFLQFLALSKCHEELCSRQRNSLQIILEHGEKLA
GMIQLRELQNIISQNRXXXXXSRLNSSHSSPENQISGALWDLIQLVGERTRRNTVLLMDR
DNAEVFYSKVSDLEQVFSCLDKQLEYVISAEQSFGIQVQRACELSNACVTIVRTAMQYRS
EHHLWYPPPERLTPWYCLAVVRNGMWHLASLMLQLLKEKSPLDVSAKSDLYTHLEVLAEV
LLETYAGAVTAKIELGDEHKGLLDEYWNRRDALLDSLYQQIKDFVEVGHQQNLNEGTDDL
NEEILAKLSSCLLPMAKRHECYNTLWKICCDLNDSGLLRNLMHDSRGPNGGFSDFVFKQL
YLRRQLSKLLRLGEEFPEELSIFLKYHQDLLWLHEVFLHQFSSASETLHELALSQEESSI
SEAEGGTGPENLTMLSKLADRKRFLNLSKIAAIAGKDVDSETKVKRIEADLKILKLQEEI
INLLPDDETKQSLDTKLLHPEDLIKLCLEGEKSAELSLLAFDVFAWTSSSFRKTHANLLE
DCWRNAADQDDWSKLYQASASEGWSDEETLQNLKDTVLFQASNRCYGPEAETFGEGFNEV
LSLRQEIAEPPIMKDSVSSVEAVLMQHTDYSEAGKLMLTAIMLGSLQDDNIEQEGPVPME
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccaggaactaagcgactcaatgtgaaccctcgtcgggacccaggatctccg
gccactcctctcgtcgagaaccggcgatctgtttccgataacccggtcccgaaccggccc
agtaccggaactccggctccctgggctcctcgcttatctgttctcgccagagttttacca
gcgaaccaaagtgagaaaggggatgaaattaagcctgtatatgttggagagtttccccaa
gttgttcgtgatgaacaggccagtatggtccagaagcatgttcatggtgatgcatatgta
tctggtggaatggagaggggaacatctctggcatggattatatgcggaaacagactcttc
gtgtggagttatctgtctcctgcagcatcgatcaattgcattgttcttgaaatccctgca
aatgtttttgaaggtggggatgtgggcagaagtggtgggaactgttggttgctttgtgtt
gtcaattgggatagcacgtctacaagaacaaagaaagttgttaaacactgtagctctgct
ggtattgtattgtgtaacaaaaaaactcaagctgcggtgtactggcctgacatttatgct
gaaggcagaactgcccctgttgttagtgttgcatcttctgatgaattggagacaaattct
tcacctattgataggaagaccaccccaaagcgacagcaactaaatatgaggcacaggagt
agtttgactgggttttgtacatttaactctttgattgcttctgcagtccctgattcccag
aatatgtgtgttgcgcttgcctgtagttcagatggcgagctatggcagtttcattgcagc
ccatctggtgttagccgtaagaaagtatatagggacaatcagactctttcctcccaaggg
ggtgacaatggtcaaaacctaggaagcaagggttatccaaggtcactgacctggtgtttt
ccaagtcttcctatgcaggaatctaacaggcagtttgttcttctgacagatcatcatatt
caatgttttaatgttgaactttgtgctgaatttgctgtatcaaaactctggtctcatgag
attattggctcagatggggatctgggcattaagaaagatttggctgggcagaagcaaatc
tggcctctcgatatgcaggtggactatcatggtaaagtgactaccattctggttgctacc
ttctgcgtggaccggagtagtagttcaaactacacacagtattctctattgactatgcaa
tataaatctggaatgagtgtagagcctacccatgaaagagttttagagaaaaaagcacct
gtgcaagtgataatcccaaaagcaagagtggaaggtgaagacttcttattctccatgagg
ctgcgggtaggaggcaagccttcaggatcagcaatcatcctttctggtgatggaacagca
acagtatctcattattttagaaactctacaaggctctataaatttgacctaccttatgat
gctggaaaggttctagatgcttcaattcttccgtctacagatgatgctgaagaaggggca
tgggttgtactcaccgagaaggcaggaatatgggcaatacctgagaaggctgttatactt
ggtggggttgaacctcctgaacgaagtttgtcacgtaaaggtagctcaaatgaaggatct
gcacaagaagagagaaaaaaccttacatttggaggcaattttgctcctagaagggctagt
tctgaagcatgggatgctggggatagacaaagggctatgactgtaagtgcacgtcaaact
gcccaagatgaagaatcagaaactttactgagccagcttttccatgattatcttttatct
gggcaagttgacgcctcgtttgaaaggttaaaaaattctggggcatttgatagggacaga
gagacaaatgtttttgcgcgaatgagcagatcaattgttgacactttagctaaacactgg
acaacaactagaggagccgagattctggcaatggctgtagtatcctcccaactcatggat
aagcaacagaaacatacaaaatttctccagtttcttgctttatccaaatgtcatgaggag
ctgtgttcgagacagagaaattctttgcaaattatcttggagcatggtgaaaagcttgct
ggaatgattcaactaagggaattgcagaacattatcagccagaaccgctnnnnnnnnnnn
nnnagtagacttaactcctcccattctagtccggaaaatcaaatatcaggtgctctctgg
gatctcattcaattagttggtgagagaacccgccggaatactgttcttctgatggacagg
gataatgctgaagtcttttacagtaaagtttctgatcttgaacaagtgttctcttgctta
gacaaacagctagagtatgtaataagtgcagagcagtcatttgggattcaggtccagaga
gcttgtgaactgtcaaatgcatgtgttactatagttcgtacagccatgcaatacagaagt
gagcatcacttgtggtatccgccacctgagcgcttaacaccttggtattgtctagctgtg
gtgcgcaatgggatgtggcacctcgcttccctcatgctgcagctgttaaaggagaaatct
ccacttgatgtgtctgcaaaatcagatttatatactcatctagaagtgctggctgaagtt
ctgcttgagacatatgctggtgctgttacagctaaaattgaactaggagatgaacacaaa
ggcttattagatgagtattggaataggagggatgcactcctagactctctttatcaacaa
atcaaagattttgtggaagttgggcatcagcagaatttaaatgaaggaactgatgatcta
aatgaagaaattcttgcgaagctttcgtcatgtttgctgcccatggcaaaacggcatgaa
tgctacaatactttatggaaaatatgctgtgatctgaatgattctggactactaagaaat
ctgatgcatgacagcaggggacctaatggagggttcagtgactttgtgttcaaacaactt
tatctaaggagacaactttccaaactgcttaggcttggggaagagtttcctgaagagcta
tccatatttttaaagtatcatcaagatcttctgtggcttcatgaagtgttcctgcatcaa
ttttcttcagcttcggaaactcttcatgaattagctctttctcaagaagaaagctcaatt
tcagaagctgaaggggggactggtcctgagaatctgactatgttatcgaaactggcagac
agaaagcgttttttgaatctctcaaaaatagctgcaatagcaggtaaggatgttgattct
gagaccaaagtgaagcgcattgaggctgatttaaagattctaaagttgcaggaagaaata
ataaaccttcttcctgatgatgaaacaaagcaaagccttgacacaaagctacttcatcca
gaagatcttatcaagctgtgccttgaaggtgaaaaaagtgcggagctgtcactgcttgct
tttgatgtatttgcatggaccagctcctccttccgtaagacccatgcaaaccttttagag
gattgctggagaaatgctgctgatcaagatgattggagcaaactctatcaggcatcggca
tctgaagggtggagtgatgaggaaaccttgcagaacttgaaagataccgtgcttttccag
gcatcaaatagatgttatggaccagaagctgaaacttttggagaagggttcaacgaagtg
ttgtcactgagacaagaaatcgcggagcctccaatcatgaaggattcggtttcttctgtg
gaagcagtactcatgcagcatacggattattcagaggccgggaagctgatgctgaccgcg
atcatgttaggtagtttacaggacgataacatagaacaagaaggtcctgtgccaatggaa
tga
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