Prunus mume (Japanese apricot): 103332590
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Entry
103332590 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103332590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103332590
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103332590
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
TBCC_N
Motif
Other DBs
NCBI-GeneID:
103332590
NCBI-ProteinID:
XP_008233559
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Position
LG5:20044140..20047272
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AA seq
555 aa
AA seq
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MGLSVAIFALITAAIEFIFLLMELPFHWIYSKWKKIFVISCVFAVLLDPLFLYIPIIKED
MKCIQMDKRLNKTAFALRSVTDLSYFVDIIVQYHRFQRIWRSYILIDILAILPLPQVVIL
IFFSKGRGPFKTRKLMNSLVLLQYMPRVLRIYFSCKEFKESPYENIKLWIKGVLNFFLYI
LASHVLGAFWYFFAIQRMTTCWKIACQTGNRCESSTNFVCEDNQFRNTTLLNDLCPINSP
NVTLFDFGIFVGVLQSGISESTNFPQKFSNCFWWGLRNLSSLGSNLQPSINTWENLFAAS
ISVIGLLLFCYLIGNLQTYMQSESDPAKVEARKIKFEKKLDEKGTEIENWLSKNVILESD
KDNLKLEVMKTVKQELKQGRDVDVENILFILPFKLRNYINSCKMLEKLKAIPKLQSMDEV
VLKAMSKHLTLKKYAANSYIIKENEPLGMMLLIVDGDVKVESSNEVSSRLLKTGDFYGEE
LLDWVKVSLFPSLLPLSTSTAWAFKDVEARLLMASDLCAVAAFYREHFSENTFSPPPVDV
QFNRLGLAKYSRVAE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggactttctgtagctatttttgctcttataacggcagcaatagagtttattttttta
cttatggaattgccgttccactggatttattcaaagtggaaaaagatatttgtaatatca
tgtgtgtttgctgttttactggatccactgttcctctacattcccatcatcaaggaggac
atgaagtgcatacagatggacaaaaggttgaacaagacggcttttgctctgcgatctgtc
acagatttgtcttactttgtcgacattattgttcaatatcatagatttcagaggatatgg
cgttcatacatactaattgacattttagctattcttccactcccacaggtagtaattctc
attttcttttctaaagggaggggaccttttaaaacaaggaagcttatgaactcccttgtt
ctgttgcaatacatgccacgggtgcttcgaatctacttctcatgtaaggaatttaaagag
agtccatatgaaaatattaaactatggattaaaggtgtactcaatttctttttgtacatc
cttgctagtcatgtactcggggccttttggtacttttttgctattcaacgaatgacaact
tgctggaaaattgcatgtcaaacaggcaatagatgtgaatctagtactaattttgtctgc
gaggataatcagttcagaaataccacacttttaaatgacttatgcccaataaattcacca
aatgtaacgctctttgattttggtatatttgttggtgtccttcaatctggtatttcggag
tcaacaaattttccacaaaagttctccaactgtttttggtggggtctgcgcaatttgagt
tctcttggctcaaacctccaacccagtattaatacatgggaaaacctatttgcggcttct
atttctgtaattggcttgctactattttgttatcttattggaaatttgcagacatacatg
cagtcagagtcagaccctgcaaaagtagaggcacgcaagattaaatttgaaaaaaagttg
gacgagaaaggaaccgagatagaaaattggttatccaagaatgtcatccttgaaagtgac
aaggataatttaaagttggaggtcatgaaaacggtcaagcaagaacttaagcaaggcagg
gatgtcgacgtggagaatatcctctttattcttcccttcaaacttcgaaactatatcaat
tcttgtaagatgttggaaaagctcaaggcaataccaaagcttcagtctatggatgaagtg
gtgttaaaagcaatgtccaagcatctgacacttaagaaatatgctgcaaatagctacatc
ataaaagagaatgaaccacttggaatgatgttgttgatcgtggacggagatgtaaaggtt
gaaagtagcaatgaagtttctagcaggttgcttaaaacaggggatttctatggagaagaa
cttctggattgggtaaaggtttctctatttccttccttgttacccctttccaccagtacc
gcttgggccttcaaggatgtggaagcccgccttctcatggccagcgacttgtgtgccgta
gccgctttttaccgtgagcatttcagtgagaacactttcagccccccaccagttgatgtt
cagtttaaccgcctaggtcttgctaaatattcaagggtagctgaataa
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