Prunus mume (Japanese apricot): 103339034
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Entry
103339034 CDS
T03196
Name
(RefSeq) eukaryotic translation initiation factor NCBP
KO
K03259
translation initiation factor 4E
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103339034
03012 Translation factors [BR:
pmum03012
]
103339034
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103339034
mRNA cycle factors
Common to processing body (P body) and stress granule
103339034
Translation factors [BR:
pmum03012
]
Eukaryotic type
Initiation factors
eIF-4
103339034
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF4E
PPV_E1_N
Motif
Other DBs
NCBI-GeneID:
103339034
NCBI-ProteinID:
XP_008240529
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All DBs
Position
LG8:833266..855933
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AA seq
237 aa
AA seq
DB search
MELVAEKESDQQNNNNNNSEKNNNTSYAQALVDSHDYNNKESDEFRERQARDLKAGLHPL
KHKFVFWYTRRTLGMRSQTPYEDNIKKIVDFTTVEGFWVCYCHLARPASLPSPTDLHLFK
DGIRPLWEDSANCHGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGENICGAVLSIRFNE
DILSVWNRNASDHQAVMALRDAIKRNLKLPHSYLMEYKPHDASLRDNSSYRNTWLRG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggagttggtagcagaaaaggagtctgaccagcagaacaacaacaacaacaacagtgag
aagaacaacaatactagttatgcacaagcacttgtagattctcatgattacaataacaag
gaatccgatgaatttcgtgaacgtcaagctcgcgacctcaaagctggcctccatcccctc
aagcacaaattcgtgttttggtacactcgtcgaacactaggaatgcgaagtcagacacct
tatgaggacaatataaagaaaattgttgacttcactacggttgaaggcttttgggtgtgc
tattgccacctagcccgtcctgctagtttgcctagcccaacagacttgcatcttttcaag
gatggaattcgccctctctgggaggactctgctaattgccatggtggtaaatggataata
cgattcaaaaaggctgtgtcgggccgtttttgggaggacctggttcttgccttggtgggt
gaccaacttgattatggagagaacatatgtggtgcagtactaagcattagattcaatgag
gacattttgagtgtctggaatcgcaatgcttctgatcatcaggctgtaatggctttaaga
gatgcaatcaagaggaacctgaagcttccacacagctatctcatggaatacaagccacat
gatgcttcactgcgtgacaattcatcatacagaaacacatggttgaggggttag
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