Pasteurella multocida subsp. multocida HN06: PMCN06_0270
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Entry
PMCN06_0270 CDS
T01776
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMCN06_0270 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmv03400
]
PMCN06_0270 (recC)
Enzymes [BR:
pmv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PMCN06_0270 (recC)
DNA repair and recombination proteins [BR:
pmv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PMCN06_0270 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFF23528
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All DBs
Position
265939..269331
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AA seq
1130 aa
AA seq
DB search
MWIRRPVFTIYYSNDLDVQKNILLTLMQDTLDDPFQSDVILVQSPGMAQWLQWKIAEQQG
ISSNIKFPMPASFIWQQYVDNLPNTEEQSQFNKASMTWRLMRLIPEHLEQVEFQSLRHYL
SSSHQTEQQKLYQLAYQIADLFDQYLVYRPEWIACWERGDEATMMAQLERKLKDTRLPIG
NAFSQDVKWQAILWRALVADILAESGQTVPLHRAYLQTQFLQFLQTQQPVNLPPRLFIFG
ISALPKGYLEIFYAMSRYCEVHLFFTNGCREYWGDLIDPRFMQRLSQMQRTGYHTASPIP
VFHHTDNARFESSYDHEHLFEGHPLLSSWGKLGRDFLYLLTELEQQEGVRSIDAYTELTS
QHLLSQVQARILYLEGKQGLNLAENDRSLTFHSCHSPMREVEVLHDYLLHLFQQDSTLTP
KDIVVMVADIDKYTPYIQAVFGQYNQTVQRQIPFSISDNRLSENDVLMASFTHLLALKES
QFSAEDILALLDIPAIRNRFQIELMELEQIRHWVAHAGIRFGVEKEQGKQEKNTNSWQAG
LERMLLGYAMREENGIWQGNLGFDPCYGLQGQLAGRLAEFIARLSAWYQFLQTPQPIEKW
QQHLLTLLTDFFAEDETNSTTLLYIQETIVQMVTDIQQTHFDQPLSSEVVSDVLSALLED
DPNSMKFLAGKVNFCTLLPMRSIPFKVVCLLGMNEGDYPRQQTPNSFDLMQYDRRKADRF
RRDDDCYLFLEALLSAQEAFYVSFVGRSIVDNQSKPPSVFVSQLIDYLVDKLSSAETQDW
QARLIEQHPMTAFSPDNFRGENGSFANQWLPLANIQKQERADFVQPIAQTVLAEDREIAL
ADLIAFIQHPVAFFFKRHLGVSFTKQEEPIEDSENFTLDGLMRYQINEQLLYCDEEKNAQ
VLAQLKVKGMLPRGEFAQIFALQQQEEIAALKTTVADYLKQEAHVVEVDLTIPSGYGDIR
LIGQLDQLYAQRRVMWRVGQIQEKHVIENWVYYLIQCAMLAQHEPPIYYGKNGQATFQAL
CASEALSVKEIALAQLQIYVESYLQGYQQMQMVPMKNIQRYLEAYGHAKTPDFEMIRTLL
HHLAEGDYASDGDIYWQRVLAQQVLDEAMLNAIGERTTSWFKLMFEQLEK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaggcgacctgtgtttacaatttattattctaatgatcttgatgtacaaaaa
aatattttgctcacgttaatgcaagatacactggatgatccctttcagtcagacgtgatt
ttagttcaaagtccaggcatggcacagtggttacaatggaaaattgcggagcagcaaggg
atttcgagtaatattaagtttcctatgcctgcgagctttatttggcaacaatacgtagac
aatttaccgaatacagaggaacaaagccaatttaataaagcgtcgatgacatggcgttta
atgcgtttaattcccgaacatcttgaacaagtcgaatttcaatcacttcgtcattattta
tcttcttctcatcaaacagaacaacaaaagttgtaccaattagcctaccaaattgctgat
ttatttgaccaatatcttgtttaccgcccagaatggatcgcttgttgggagcgtggtgat
gaagccactatgatggcacagttagaacgcaagctaaaagatacacgcctaccaataggc
aacgctttttctcaagatgttaaatggcaagcgatactatggcgtgctctagtggcggat
attttggctgaaagcggtcagactgttcccttacatcgtgcttatttacaaacacaattt
ttgcagttcttacagacccagcaacccgtcaatttacctccacgtctttttatttttggt
atctcagcgttgccaaaaggctatttagagattttttatgctatgagtcggtattgtgag
gtacatttatttttcaccaatggctgtcgtgaatattggggtgatttaattgatccgcgt
tttatgcaacgcttaagccaaatgcaacgaactggctaccataccgcttcacctatacct
gtttttcaccatacagacaatgcccgatttgaatcaagttatgatcatgagcatttattt
gaggggcatcctttgctatcaagctggggaaaattgggtcgagattttttatatttgtta
acagaattagaacaacaggaaggcgtacgaagtattgatgcgtacaccgagttaacttcc
caacatctcttatctcaggtacaagcgcgtattttatatttagaaggtaagcaaggttta
aatttggctgaaaatgaccgctctttaacgttccattcttgccatagccctatgcgtgaa
gtggaagtcttacatgactatttgcttcatttatttcagcaagattcaacgcttacacca
aaagatattgtggtgatggtggcggatattgataaatatacaccttatattcaagctgta
tttgggcagtacaatcagaccgtacagcgacagattcctttttctatttcagataaccgt
ctttctgaaaatgacgtgttaatggcaagttttactcacttacttgctttaaaagagagt
cagtttagcgcagaagatatcttagctttattagatattcctgcgattcggaataggttt
cagattgagttaatggagttagaacagattcggcattgggtcgcacatgctggcatacgt
tttggtgtagaaaaagaacaaggtaaacaagaaaagaacactaactcatggcaagccggg
ctagagcggatgctacttggttatgcgatgcgtgaggaaaatgggatttggcaagggaat
ttaggctttgatccttgttatggactacaagggcaattagctggacgtttggcggagttt
attgcaaggttatcagcatggtatcagtttttacaaacgcctcagcctattgaaaaatgg
caacagcatttacttacgcttttaacagatttcttcgctgaggatgaaacgaatagtacc
actttgctatatattcaagaaacgatagtgcaaatggtaacagatattcaacaaacccat
tttgatcaaccgttaagtagtgaagtggtttctgatgtcctgtcggcattattagaagat
gatccgaatagcatgaagtttctggcagggaaagtgaatttctgcaccttgctaccgatg
cgttcgattccctttaaagtggtgtgtttattggggatgaatgaaggtgattatcctcgt
caacaaacaccaaatagttttgatttgatgcaatatgatcgacgtaaagctgaccgtttt
cgccgtgatgatgattgttatttgttccttgaagcgctgctgtcagcacaagaggcattt
tatgtgagttttgtgggacgttccattgtggataaccaaagcaaacctccgtctgtgttc
gtcagtcaattgattgactatttagtagataagttatcaagcgctgaaacacaagattgg
caagctcgattaattgaacagcatccgatgacagcatttagtccagataatttccgagga
gaaaacggatcttttgctaaccaatggttacccctagcaaatattcagaaacaagagagg
gcggattttgtccaacctatcgcacaaacagtgttagccgaggatcgtgaaattgcgtta
gcggatttaattgcctttattcaacatcctgttgcgtttttctttaaacgtcatttaggc
gtttcttttactaaacaagaagaacctattgaagacagcgaaaattttactttagatggc
ttaatgcgctatcaaattaatgagcaattgctttattgtgatgaggaaaaaaacgcgcag
gttctcgctcaattaaaagtaaaaggtatgctaccgcgtggtgaatttgcccagatcttt
gcgttacaacaacaagaagaaattgctgcgttaaaaacaaccgttgccgattatttaaaa
caagaggcgcatgtcgtcgaagtggatttgactatcccgagtggctatggggatattcgt
ctgattgggcagctagatcagttgtatgcacagcgtagagtgatgtggcgagtaggacaa
attcaggaaaaacatgtaattgaaaattgggtgtattaccttattcaatgtgcaatgtta
gcacagcatgaacctcctatttattatggtaagaatgggcaagcgacctttcaagcattg
tgtgctagcgaggcgttaagtgtaaaagaaatcgcgttagcacaattacaaatctatgtt
gaaagttatttgcagggctatcagcagatgcaaatggttccgatgaaaaatattcaacgt
tatttagaagcatatggacatgctaagacgccagattttgagatgattcggacattgtta
catcatctagcggaaggggattatgcttcggatggggatatttactggcaacgagtactt
gcacaacaagtactcgatgaggcgatgctcaacgcgataggcgaacggacaacatcgtgg
tttaagcttatgtttgagcagcttgaaaaatag
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