Pseudomonas mendocina ymp: Pmen_2722
Help
Entry
Pmen_2722 CDS
T00510
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00290
Valine, leucine and isoleucine biosynthesis
pmy00660
C5-Branched dibasic acid metabolism
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01210
2-Oxocarboxylic acid metabolism
pmy01230
Biosynthesis of amino acids
Module
pmy_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Pmen_2722
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Pmen_2722
Enzymes [BR:
pmy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Pmen_2722
4.2.1.35 (R)-2-methylmalate dehydratase
Pmen_2722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ABP85477
UniProt:
A4XVW1
LinkDB
All DBs
Position
complement(2987056..2987703)
Genome browser
AA seq
215 aa
AA seq
DB search
MKAFTQHTGLVCPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPNQDNSK
RPINKDFVLNFPRYQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSFADIFFNNS
FKNGLLPIVLKDEEVDALFEQAEATEGYQLTVDLDAQTVTRPDGVQYSFEVDAFRKHCLL
NGLDDIGLTLQDQDAIRAFEAKHQQSSPWLFGAIK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctttacccaacataccggcctggtctgcccgctcgatcgtgccaacgtcgac
accgatcagatcattcccaagcagtttctgaagtcgatcaagcgcaccggcttcggcccc
aatctgttcgacgagtggcgctacctggatgtcggccagccgaaccaggacaattccaag
cgtccgatcaacaaggatttcgtgctgaacttcccgcgctatcagggcgccagcgtgctg
ctggcccgcgagaacttcggttgcggttcctcgcgcgaacacgcgccctgggcgctggac
gagtacggtttccgcaccgtgatcgcgccgagcttcgccgacatcttcttcaacaacagc
ttcaagaacggcctgctgccgatcgttctcaaggatgaagaggtcgatgcgctgttcgaa
caggccgaggccaccgagggctatcaactgaccgtcgacctcgatgcgcaaaccgtgacc
cgtcccgatggcgtgcagtacagcttcgaggtcgatgccttccgcaagcactgcctgctc
aacggcctggacgacattggcctgaccctgcaggatcaggacgcgatcagggccttcgaa
gccaaacaccagcagagcagcccctggctgttcggcgcgatcaagtaa
Pseudomonas mendocina ymp: Pmen_2723
Help
Entry
Pmen_2723 CDS
T00510
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00290
Valine, leucine and isoleucine biosynthesis
pmy00660
C5-Branched dibasic acid metabolism
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01210
2-Oxocarboxylic acid metabolism
pmy01230
Biosynthesis of amino acids
Module
pmy_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Pmen_2723
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Pmen_2723
Enzymes [BR:
pmy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Pmen_2723
4.2.1.35 (R)-2-methylmalate dehydratase
Pmen_2723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
ABP85478
UniProt:
A4XVW2
LinkDB
All DBs
Position
complement(2987715..2989142)
Genome browser
AA seq
475 aa
AA seq
DB search
MTGKTLYDKLWEMHEVKRRDDGSSLIYIDRHILHEVTSPQAFEGLRLAGRKPWRIDANIA
TPDHNVPTTKAERQGGLEAIADEVSRIQVQTLDENCDDFGILEFKMNDVRQGIVHVVGPE
QGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAKKMKNMQVRVEGKL
PFGVTAKDIVLAVIGKIGTAGGNGHALEFAGSAIRDLSLEGRMTICNMSIEAGARVGLVA
VDEKTIAYVKDRPFAPKGSDWDKAVTQWQNLVSDADAVFDTVVELKAEDIKPQVSWGTSP
EMVLAVDQNVPDPAVETDPVKKDSITRALKYMGLSANQPITDIQLDRVFIGSCTNSRIED
LRAAAEVAKGRKVASTVKQALVVPGSGLVKAQAEAEGLDKIFIEAGFEWREPGCSMCLAM
NPDKLGSGEHCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAVTGRFIDVRELIQA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgactggcaagacgctctacgacaagctctgggaaatgcacgaagtgaaacgtcgcgac
gacggttcctcgttgatctacatcgaccgtcacatcctccacgaagtgacctcgccgcag
gccttcgaaggcctgcgtctggccgggcgcaagccgtggcgcatcgatgccaacatcgcc
accccggaccacaacgtgccgaccaccaaggccgagcgccagggcggcctcgaagccatc
gccgacgaagtctcgcgcatccaggtgcagaccctggacgagaactgcgatgacttcggc
atcctcgaattcaagatgaacgacgtgcgtcagggcatcgtgcacgtggtcgggccggag
cagggcgccacgctgccgggcatgaccgtggtttgcggcgactcgcacacctccacccat
ggcgccttcggcgcgctggcccatggcatcggcacctccgaggtcgagcatgtgctcgct
acccagtgcctggtggccaagaagatgaagaacatgcaggtacgcgtcgaaggcaaattg
ccgttcggcgtcaccgccaaggacatcgtgctggccgtgatcggcaagatcggcaccgcc
ggcggcaacggccatgccctggaattcgccggcagcgcgattcgcgacctttctctggaa
gggcgcatgaccatctgcaacatgtccatcgaggctggcgcccgtgtgggcctggtggcg
gtggacgaaaagaccatcgcctacgtcaaggatcgtccgttcgcgcccaagggcagcgac
tgggacaaggccgtgacgcagtggcagaacctggtgtccgacgccgatgcagtgttcgac
accgtggtggaactcaaggccgaagacatcaaaccgcaggtcagctggggcacctcgccg
gagatggtcctggccgtcgaccagaacgtgccggatccggccgttgaaactgacccggtg
aagaaggattcgatcactcgtgcactcaagtacatgggcctgagcgccaaccagccgatc
accgatatccagctcgatcgcgtgttcattggttcctgcaccaactcgcgcatcgaagac
ctgcgcgccgccgccgaggtggccaagggtcgcaaggtcgccagcaccgtcaagcaggcg
ctggtggtgccgggctccggcctggtcaaggcgcaggccgaagcggaagggctggacaag
atctttatcgaggccggtttcgaatggcgtgagccgggctgctccatgtgcctggcgatg
aacccggacaagctgggcagcggcgagcattgcgcgtccacctccaaccgcaacttcgaa
gggcgtcagggcgccggtggccgtacccacctggtgagcccggccatggctgccgctgcg
gcggtgaccggccgcttcatcgacgttcgcgaattgatccaggcctga
DBGET
integrated database retrieval system