Prevotella melaninogenica: HMPREF0659_A6934
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Entry
HMPREF0659_A6934 CDS
T01286
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pmz
Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmz03016
]
HMPREF0659_A6934 (truA)
Enzymes [BR:
pmz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HMPREF0659_A6934 (truA)
Transfer RNA biogenesis [BR:
pmz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0659_A6934 (truA)
Prokaryotic type
HMPREF0659_A6934 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CBM39
Motif
Other DBs
NCBI-ProteinID:
ADK97146
LinkDB
All DBs
Position
II:complement(678616..679377)
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AA seq
253 aa
AA seq
DB search
MQRYFITLSYDGTAYHGWQIQPNGISVQEVLEHALSTILRESIAITGAGRTDAGVHGRMM
VAHFDTELSFDCAQLVYKVNRLLPRDVSVSRIEPVGEDLHARFSATSRTYHYYVHTGKQP
FSRQYSCALHYSLDFDKMNEAAAYLIGEKDFKCFCKAGADVKTTICNLTEARWIPTNDEF
ALATDDTVTNWCFVITANRFLRNMVRAVVGTLVEVGRGRLSLDEFKKIVDGGTRSDAGES
MPGNALFLWEVKY
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgatattttatcaccctttcatacgatggaacagcctatcatggctggcagatt
caacccaatgggatttctgtacaagaagtattggaacacgctttgtctacaatactaaga
gaatcgattgctattacaggtgcaggacgtaccgatgctggtgtacatggcagaatgatg
gttgcacactttgacacggaattgtcgtttgactgtgcacaattagtttataaagtaaat
cgtttattaccacgtgatgtctctgtaagtaggattgaacctgtcggtgaagacctccac
gcacgtttctcagcgacctcacgtacttatcattattatgttcatacggggaaacaacct
ttctcaagacagtattcgtgtgcgcttcattactcattagactttgataagatgaatgag
gctgcagcctatttaataggcgagaaggactttaaatgtttctgtaaagcgggtgcggat
gtaaagactactatctgtaatctgacagaggcacgatggataccaaccaatgatgagttt
gctttggctacagatgatactgttacgaattggtgttttgtaataactgctaaccgattc
ttacgcaatatggtgcgtgcagttgttggaactttagtcgaagtgggacgaggacgtctt
tcattagatgaatttaagaagattgtagacggtggaacaagaagcgatgctggtgagagt
atgcctggcaacgccctcttcctttgggaagtaaagtattag
DBGET
integrated database retrieval system
