Polynucleobacter asymbioticus: Pnuc_0003
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Entry
Pnuc_0003 CDS
T00502
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pnu
Polynucleobacter asymbioticus
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnu03032
]
Pnuc_0003
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_0003
Enzymes [BR:
pnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pnuc_0003
DNA replication proteins [BR:
pnu03032
]
Prokaryotic type
DNA Topoisomerases
Pnuc_0003
DNA repair and recombination proteins [BR:
pnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pnuc_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
IFT20
Geminin
Motif
Other DBs
NCBI-ProteinID:
ABP33225
UniProt:
A4SUR1
LinkDB
All DBs
Position
2851..5349
Genome browser
AA seq
832 aa
AA seq
DB search
MTEEKKVVEQYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAG
YCSEITVVIQTDNSISIVDNGRGVPTGIKYDDKHEPKRSAAEIVMTELHAGGKFDQNSYK
VSGGLHGVGVSCVNALSKWLKLTIRRDGKAHYMEFARGVIQNRNVVDEDGVMVSPITVTG
DTELSGTEVHFLADETIFGNVEFHYEILVKRIRELSFLNNGVHIKLIDQRTGQEEDFAFS
GGVKGFVEYINQTKNVLHPNIFYAEGVRPSDLGGQITAEVSMQWNDSFSEQVLCFTNNIP
QRDGGTHLTGLRAAMTRVINKYIDENEVAKKAKVEISGDDMREGLACVLSVKVPEPKFSS
QTKDKLVSSEVRGPVEEIVAEALSAYLQERPADAKILCGKIVDAARAREAARKARDMTRR
KGVLDGLGLPGKLADCQEKDPTKSELFIVEGDSAGGSAKQGRDRRFQAILPLKGKILNVE
KARFDKMLASQEVVTLITVLGTGIGIEEYKADKLRYHRIIIMTDADVDGSHIRTLLLTFF
YRQMPELIERGHIYIAQPPLYKVKFGKNEQYIKDDNELNQLLLKIALETASLQTPTGEVI
EGESLNELAKHYQVIQSIVDRLSRTIDEDALRAIASGTQLNLDTEKSANESADRLRQALA
DSLNPLALPPEIIVQKEDRTERFRLLLSRRIHGNLKLSTINSDFVHGDDYQSLANAAAVL
SGKVLPGTKVRRGDPDKNQKEQTINDFRAAFSWLLSEAERVLSRQRYKGLGEMNPSQLWE
TTMDASSRTLLQVKIEDAIAADQVFTTLMGDEVEPRRAFIEKNALIARNLDV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaaaaaaagtagtagagcagtacggtgctgcatcgattcaaatcttagaa
ggtcttgaggctgttcgtaaacgcccagggatgtacatcggagatacatctgatggcaca
ggccttcatcatttggtttttgaggtcttggataattcgattgatgaagcattagcaggc
tattgctcggaaatcacggttgttattcaaactgataattcaatttcaattgttgataac
gggcgcggcgttccaacgggtattaaatacgacgataaacacgaacccaaaagaagtgct
gctgaaatcgtaatgactgagttgcatgctggtggtaagttcgaccaaaacagctataaa
gtttctggcggtcttcatggtgtgggtgttagttgtgtaaatgcactatctaagtggtta
aaacttaccattcgtcgtgatggtaaggcgcactatatggagtttgcgcgcggcgttatc
caaaaccgtaatgttgtagatgaagatggggtaatggtgtccccaatcacggttactggt
gataccgagctctcgggtacggaagttcatttcttggcggatgaaactatttttggaaat
gtagagttccattatgaaattctagttaaacgtattcgtgaactctcattcttaaataat
ggtgtgcacattaagttgattgatcagcgcacagggcaagaagaagattttgcattctct
ggcggtgttaaaggttttgttgaatatatcaatcaaactaagaatgttttacacccgaat
attttttatgctgagggtgttcgcccttcagatttaggtggacaaattactgccgaagta
tctatgcagtggaatgatagttttagtgagcaagtactttgttttacaaataacattcca
cagcgcgatggtggaacccatttaactggcctgcgtgctgcaatgactcgtgtcatcaat
aaatacattgatgaaaatgaagttgctaaaaaggccaaagtagaaatttccggtgacgat
atgcgtgaaggcttagcctgcgtgttatcggtgaaagttccagagcctaaattctcaagc
caaacaaaagataaattagtttcaagtgaggtgcgcggccctgtagaagagattgttgcg
gaagcactcagtgcatacctacaagagcgtccagccgacgcgaagattctgtgcggcaag
atagttgatgcagcacgtgctcgtgaggcagcgcgcaaagcgcgtgacatgaccaggcgt
aaaggtgtattggatgggcttggtttgcctggtaagctggccgactgtcaagaaaaggat
ccaaccaaatctgaattgtttattgtcgagggtgattctgcaggcggctcagccaaacaa
ggccgcgatcgtcgctttcaagcaattcttcctttaaaaggaaaaatccttaacgtagaa
aaagcgcgtttcgacaaaatgctagcaagccaagaggtggttaccttaatcactgtcttg
ggtactggtattggaattgaagaatataaagccgacaaacttcgctatcaccgaatcatc
atcatgaccgacgcggacgttgacggaagccatattcgtacgctgttgctgacattcttt
tatagacaaatgccggagttgattgagcgtggccatatttatattgctcaaccaccactc
tacaaagttaagtttggaaaaaatgagcaatacataaaagatgacaacgaattaaatcag
ttgttattgaaaattgcgctcgagaccgcttctttacaaacgcctactggtgaagtcatt
gagggtgagtcgctaaacgagttggctaagcactaccaagttatccaatctattgttgac
cgtttatcccgcacgatcgatgaggatgctttacgagcaattgcatcgggtacacagtta
aatttagatacagaaaaatctgcaaatgaatcagccgatcgcttaagacaggcactcgct
gattcattaaacccattggcgctccccccggagatcattgttcagaaagaggaccgcaca
gaacgatttagattgttgctgtcccgccgcattcacggcaatctgaagctttcaaccatt
aactcagattttgttcatggcgatgattatcaaagccttgctaatgccgcagctgtttta
tctggcaaagtattgcccggcaccaaagtgcgtcgtggcgatccagacaagaatcagaaa
gagcaaacaattaatgactttagggctgccttctcatggttattgtcagaggctgagcgc
gtattgagtcgtcaacgctataagggtctgggcgagatgaacccttctcagttgtgggag
accacaatggatgcaagctctcggaccttgctgcaagtgaagatagaggatgcaattgct
gcagaccaagtatttacaacattaatgggtgatgaggttgagcctcgtcgcgcgttcatt
gaaaagaacgcattgattgctcggaacctagacgtttaa
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