KEGG   Polynucleobacter asymbioticus: Pnuc_0003
Entry
Pnuc_0003         CDS       T00502                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pnu  Polynucleobacter asymbioticus
Brite
KEGG Orthology (KO) [BR:pnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnu03032]
    Pnuc_0003
   03400 DNA repair and recombination proteins [BR:pnu03400]
    Pnuc_0003
Enzymes [BR:pnu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Pnuc_0003
DNA replication proteins [BR:pnu03032]
 Prokaryotic type
  DNA Topoisomerases
   Pnuc_0003
DNA repair and recombination proteins [BR:pnu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Pnuc_0003
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 Toprim_4 IFT20 Geminin
Other DBs
NCBI-ProteinID: ABP33225
UniProt: A4SUR1
LinkDB
Position
2851..5349
AA seq 832 aa
MTEEKKVVEQYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAG
YCSEITVVIQTDNSISIVDNGRGVPTGIKYDDKHEPKRSAAEIVMTELHAGGKFDQNSYK
VSGGLHGVGVSCVNALSKWLKLTIRRDGKAHYMEFARGVIQNRNVVDEDGVMVSPITVTG
DTELSGTEVHFLADETIFGNVEFHYEILVKRIRELSFLNNGVHIKLIDQRTGQEEDFAFS
GGVKGFVEYINQTKNVLHPNIFYAEGVRPSDLGGQITAEVSMQWNDSFSEQVLCFTNNIP
QRDGGTHLTGLRAAMTRVINKYIDENEVAKKAKVEISGDDMREGLACVLSVKVPEPKFSS
QTKDKLVSSEVRGPVEEIVAEALSAYLQERPADAKILCGKIVDAARAREAARKARDMTRR
KGVLDGLGLPGKLADCQEKDPTKSELFIVEGDSAGGSAKQGRDRRFQAILPLKGKILNVE
KARFDKMLASQEVVTLITVLGTGIGIEEYKADKLRYHRIIIMTDADVDGSHIRTLLLTFF
YRQMPELIERGHIYIAQPPLYKVKFGKNEQYIKDDNELNQLLLKIALETASLQTPTGEVI
EGESLNELAKHYQVIQSIVDRLSRTIDEDALRAIASGTQLNLDTEKSANESADRLRQALA
DSLNPLALPPEIIVQKEDRTERFRLLLSRRIHGNLKLSTINSDFVHGDDYQSLANAAAVL
SGKVLPGTKVRRGDPDKNQKEQTINDFRAAFSWLLSEAERVLSRQRYKGLGEMNPSQLWE
TTMDASSRTLLQVKIEDAIAADQVFTTLMGDEVEPRRAFIEKNALIARNLDV
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgactgaagaaaaaaaagtagtagagcagtacggtgctgcatcgattcaaatcttagaa
ggtcttgaggctgttcgtaaacgcccagggatgtacatcggagatacatctgatggcaca
ggccttcatcatttggtttttgaggtcttggataattcgattgatgaagcattagcaggc
tattgctcggaaatcacggttgttattcaaactgataattcaatttcaattgttgataac
gggcgcggcgttccaacgggtattaaatacgacgataaacacgaacccaaaagaagtgct
gctgaaatcgtaatgactgagttgcatgctggtggtaagttcgaccaaaacagctataaa
gtttctggcggtcttcatggtgtgggtgttagttgtgtaaatgcactatctaagtggtta
aaacttaccattcgtcgtgatggtaaggcgcactatatggagtttgcgcgcggcgttatc
caaaaccgtaatgttgtagatgaagatggggtaatggtgtccccaatcacggttactggt
gataccgagctctcgggtacggaagttcatttcttggcggatgaaactatttttggaaat
gtagagttccattatgaaattctagttaaacgtattcgtgaactctcattcttaaataat
ggtgtgcacattaagttgattgatcagcgcacagggcaagaagaagattttgcattctct
ggcggtgttaaaggttttgttgaatatatcaatcaaactaagaatgttttacacccgaat
attttttatgctgagggtgttcgcccttcagatttaggtggacaaattactgccgaagta
tctatgcagtggaatgatagttttagtgagcaagtactttgttttacaaataacattcca
cagcgcgatggtggaacccatttaactggcctgcgtgctgcaatgactcgtgtcatcaat
aaatacattgatgaaaatgaagttgctaaaaaggccaaagtagaaatttccggtgacgat
atgcgtgaaggcttagcctgcgtgttatcggtgaaagttccagagcctaaattctcaagc
caaacaaaagataaattagtttcaagtgaggtgcgcggccctgtagaagagattgttgcg
gaagcactcagtgcatacctacaagagcgtccagccgacgcgaagattctgtgcggcaag
atagttgatgcagcacgtgctcgtgaggcagcgcgcaaagcgcgtgacatgaccaggcgt
aaaggtgtattggatgggcttggtttgcctggtaagctggccgactgtcaagaaaaggat
ccaaccaaatctgaattgtttattgtcgagggtgattctgcaggcggctcagccaaacaa
ggccgcgatcgtcgctttcaagcaattcttcctttaaaaggaaaaatccttaacgtagaa
aaagcgcgtttcgacaaaatgctagcaagccaagaggtggttaccttaatcactgtcttg
ggtactggtattggaattgaagaatataaagccgacaaacttcgctatcaccgaatcatc
atcatgaccgacgcggacgttgacggaagccatattcgtacgctgttgctgacattcttt
tatagacaaatgccggagttgattgagcgtggccatatttatattgctcaaccaccactc
tacaaagttaagtttggaaaaaatgagcaatacataaaagatgacaacgaattaaatcag
ttgttattgaaaattgcgctcgagaccgcttctttacaaacgcctactggtgaagtcatt
gagggtgagtcgctaaacgagttggctaagcactaccaagttatccaatctattgttgac
cgtttatcccgcacgatcgatgaggatgctttacgagcaattgcatcgggtacacagtta
aatttagatacagaaaaatctgcaaatgaatcagccgatcgcttaagacaggcactcgct
gattcattaaacccattggcgctccccccggagatcattgttcagaaagaggaccgcaca
gaacgatttagattgttgctgtcccgccgcattcacggcaatctgaagctttcaaccatt
aactcagattttgttcatggcgatgattatcaaagccttgctaatgccgcagctgtttta
tctggcaaagtattgcccggcaccaaagtgcgtcgtggcgatccagacaagaatcagaaa
gagcaaacaattaatgactttagggctgccttctcatggttattgtcagaggctgagcgc
gtattgagtcgtcaacgctataagggtctgggcgagatgaacccttctcagttgtgggag
accacaatggatgcaagctctcggaccttgctgcaagtgaagatagaggatgcaattgct
gcagaccaagtatttacaacattaatgggtgatgaggttgagcctcgtcgcgcgttcatt
gaaaagaacgcattgattgctcggaacctagacgtttaa

DBGET integrated database retrieval system