Paenibacillus odorifer: PODO_03470
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Entry
PODO_03470 CDS
T03326
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pod03009
]
PODO_03470
Enzymes [BR:
pod01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PODO_03470
Ribosome biogenesis [BR:
pod03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PODO_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Met_10
MTS
Methyltransf_25
Methyltransf_15
PrmA
Cons_hypoth95
Methyltransf_11
Methyltransf_12
UPF0020
Methyltransf_32
Methyltransf_23
N6_N4_Mtase
PCMT
Methyltransf_24
FUT8_N_cat
TPMT
Motif
Other DBs
NCBI-ProteinID:
AIQ72407
LinkDB
All DBs
Position
775999..777546
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AA seq
515 aa
AA seq
DB search
MSKHRSGRSTSRPAGKAPVAGLPVNKNDEVMLDIIGMTHEGEGVGRVEGFTLFVQGALPG
EKVRAKVLKTKKQYGYAKLLNIVEASSARIAAPCEIYDQCGGCQLQHMDYTAQLAWKRQL
VVDNLERIGKLRVSGGGDSGKSKENEAVESQTDSANYGGIADGTTDGAGVAHTDGILVRP
TLGMDEPWRYRNKAQVPIGVTEGGLVGGFYARGSHRIIDMETCLIQHEDNDDVVRKVKDI
GRELGISAYSEETGRGLLRHVVVKKAFRTGEMMVVLVTNGRDIPHLDAWLGSIREQLPDV
VSICQNVNTQRTNVIFGGETRVLWGRDVIYDYIGDVQFAISARSFYQVNPAQTEVLYGKT
VEYAGLTGNETVIDAYCGIGTISLFLAQHAAKVYGVEIVPEAIEDARANAKLNEMKNVVF
EVGASEDVIPNWKEQGITVDVIVVDPPRKGCDPRLLETILAMKPERVVYVSCNPSTLARD
LRVLEDGGYKTVEVTPVDMFPHTVHVECCVSLIKK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaccgcagtggacgcagcaccagccgcccagccggcaaggcgcctgtcgcc
ggactgcctgtgaataaaaatgatgaggttatgctcgatattatcggcatgacccatgaa
ggtgaaggggtaggccgcgtagaaggctttaccctttttgtgcagggagcccttcccgga
gagaaagtccgggcaaaggtgctcaagaccaaaaagcagtatggctacgccaaactgctg
aatatagtagaagcaagcagcgcccgcatcgcggcgccttgcgagatctatgaccaatgc
ggcggctgccagctgcagcatatggactatactgctcagctggcgtggaaacggcagctg
gtggtggacaacctggagcggattgggaagcttcgggtgagtggtggcggggatagcgga
aagagcaaagagaatgaagctgttgagagtcagacggacagtgccaactatggcggcatt
gcagatggtacgactgatggcgctggagtagctcatacagatggcattcttgtccgcccg
acactcggcatggacgagccttggcgttaccgcaacaaggctcaggtaccaattggtgta
accgaaggcggtcttgtaggaggcttctatgcacgcggaagtcaccgtatcatcgatatg
gaaacctgcttaatccagcatgaggataatgatgacgttgtgcgcaaggtgaaagacatc
ggcagagaacttggcatctctgcttatagtgaagaaaccggtcgtggcctgctgcgccat
gtcgtcgtgaagaaagctttccgtaccggtgaaatgatggttgtcctcgtaaccaacggc
cgcgacatcccacacctggacgcctggctcggcagcatccgcgaacagctgccagatgta
gtcagcatctgccagaacgtcaacactcagcgcacgaatgtcatcttcggtggcgaaacc
cgcgtcctgtggggcagagacgtcatctatgactacatcggcgatgtacagttcgctatc
tcagcgcgttcgttctatcaagtgaacccggcacagactgaggtgttgtacggtaaaacc
gttgaatatgccggactgactggcaatgaaacggttattgatgcctattgcgggatcggt
acgatctccctctttttggcgcagcatgcggctaaggtatacggtgtcgaaattgtaccg
gaagctattgaggatgcccgggcgaatgcgaagttgaatgagatgaagaatgtagtgttc
gaggttggtgcctctgaagatgtcattccgaattggaaagagcaagggattacggtggat
gttatcgtggtcgatccaccgcgtaagggttgcgatccgcggttgttagagacgattctg
gctatgaagccggagcgtgtggtgtatgtgtcgtgtaatccatcgacattagcaagggac
ttgcgtgtgttggaggatggcgggtacaagacagtggaggtaactccggtggatatgttc
ccgcatacggtgcatgtggagtgctgtgtgtcgcttattaaaaagtaa
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