Pseudomonas orientalis: BOP93_10945
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Entry
BOP93_10945 CDS
T05323
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
poi
Pseudomonas orientalis
Brite
KEGG Orthology (KO) [BR:
poi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poi03400
]
BOP93_10945
DNA repair and recombination proteins [BR:
poi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOP93_10945
Archaeal homologous recombinant proteins
BOP93_10945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
nSTAND3
MMR_HSR1
RsgA_GTPase
AAA_22
ATS
Motif
Other DBs
NCBI-ProteinID:
AUZ46087
UniProt:
A0A2L0RVG4
LinkDB
All DBs
Position
complement(2516048..2519686)
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQILIDLDSEQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKDARDVHKQLQDQASGVVPLAAEARAELDQQLS
QAQQQLKTHQAQLKQLELQHTWLKELREWQERRQSAAEQLQQAQQLWDSQGQQRQDLTRL
DQLAPQRHHFVRRAELDALLAPLAAQIQQHLEQQTALHSRQEQAQQQQAAAQSALAQAQH
NQASAAPLLRQAFEEQTTLTHLTKELAKRTEEKQQHESACHEGQALLTGLQDKQAQVAKR
LQSLATELERSATLAPLSDAWTAYRDRLQQLMMIGNRLNQGEAELPQLEQRVNAAVEQFT
QQREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLARLWGSQQQLDTQAGT
LAQKLADAAQQREQLNQTGLQTKAELTVAEQTLTVTKQLLERQRLARSASVEELREQLQD
GQPCPVCGSHEHPYHQPEALLQSLGRHDESEEATAQQAVDRLKEKLTELRGEVGGLIAQQ
KEFLAQQEQLALQQQALAPSLEAHPLYATLLNQDAVKRTDWLAQQLAQLTQSIAQDEQRQ
GALLNLQQNAGRLQQQLQAAQDASQQARQLLLDQQRALASDRERLDTELASFASLLPAAT
LEGLRSEPAATFLQLDQQVSQRLEQLGHQRDELAEQQERQQAIEKQQTHQQHRQQQSEAL
NLQVAQLCSQQHDAQAKLSDLLGAHESAEQWQQQLDQAVSQARQSEADASQELHAVHTAL
VQLVADLKALLERQQALETERQALDTRITAWRAAHPELDDQGLTRLLAFDEAQVTDLRQQ
LHTREKAVEQAGVLLQEREQRLAEHQALHNGNLDTEQLDNSLAALNQQLAEGEKHCAELR
ARQAEDQRRQDANHALAEQIAKAYDQWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctcgcgtccctggccggaccgttcgagatc
gacttcaccgccgagccgctggccagcgccggtctgttcgccatcaccgggccgaccggc
gccggcaagagcaccctgctcgatgcgctgtgcctggcgctgtttggcgcggtgccgcgc
ctgggcgataccggccaggccaagatgccggatgccgacagcgacatttccatcggcgac
ccgcgcaccctgctcagacggggcaccggcggtggttatgccgaggtggatttcgtcggc
gtcagcggccgccgctaccgtgcgcgctgggaagccaatcgcgcgcgcgacaaggccagc
ggcaagttgcagaacagccgccagatcctgatcgacctggacagcgagcaactgctggcc
agtcagaaaaccgaatacaagacccagctggaactggccctgggcctgaacttcgaacag
ttcacccgcgcagtgctgctggcgcaaagcgagttcagcgcctttctcaaggccaacgac
aacgagcgcagcgaactgctggaaaagctcaccgacaccgcgctgtatacccaactgggc
cgccgtgcgttcgacaaggccaaggatgccagggacgttcacaaacagttgcaggaccag
gccagcggcgtggtgcctctggctgccgaagcccgcgccgagctggatcaacaactgagc
caggcacaacagcaactcaaaacccaccaggcccaactcaagcagttggagttgcagcac
acctggctcaaggagttgcgcgagtggcaggagcgccggcaaagcgccgccgagcagctg
cagcaagcccaacaactgtgggacagccaaggccagcagcgccaggacctgacgcgcctg
gaccagctcgcgccgcagcgccatcacttcgtgcgtcgcgctgaactcgacgcattgctg
gccccgctcgccgcgcagattcaacagcaccttgagcaacaaaccgcgctgcacagccgt
caggaacaggcgcaacaacagcaggccgccgctcaatcggccctggcccaagcccagcac
aaccaggcaagcgccgcgcctttgctgcgccaggccttcgaagaacagaccaccctcacc
cacttgaccaaagagctggccaagcgcaccgaggaaaagcagcagcacgaaagcgcctgc
cacgaaggccaagccttgctcacaggcttgcaggacaaacaggcccaagtcgccaagcgc
ctgcaaagcctggccaccgaacttgagcgcagcgccaccctcgcgccactgagcgacgcc
tggacggcctaccgcgaccgcctgcaacaactgatgatgatcggcaatcgcctgaaccag
ggcgaggccgaactgccgcagcttgaacagcgcgtcaacgccgccgtcgagcaatttacc
cagcaacgcgaggccctggacctgctgtaccaggaggccggcgccgaaccccacgcggtg
gccgagcaaattcaattgctcgccagcctcctgcaggacaatcgcaagcaacaacgcgct
ttcgaggacctcgcgcgcttgtggggcagtcaacagcagctcgacacccaggccggcacc
ctggcgcagaaactcgccgatgcggcgcagcagcgcgagcaactgaaccagaccggcctg
caaaccaaagccgaactgacggtggccgagcaaaccctgacggtgaccaagcaactgctg
gagcgccagcgcctggcccgcagtgccagcgtcgaggaactgcgcgaacagttgcaggat
ggccagccctgcccggtctgcggcagccacgaacatccctatcaccagcccgaagcgctg
ttgcagagcctgggtcgccacgatgaaagcgaagaggccacagcgcagcaagccgtcgac
cgcctcaaggaaaaactcaccgagctacgcggcgaagtgggtgggctgatcgcccagcaa
aaggaatttttagcccaacaggaacagctggcgctgcagcagcaggcgttggcgccaagc
cttgaagcgcacccactgtacgcgacgctgttgaatcaggacgcggtcaagcgcaccgac
tggctggcccagcaactggcgcaactgacgcaaagcatcgcccaggacgaacagcgccag
ggcgccctgctcaacctgcaacaaaacgccgggcgtttgcagcagcaattgcaggccgcc
caggacgcgagccagcaggcccgacaattgttgctcgaccagcagcgcgccctggccagt
gaccgcgagcgcctcgatacggagcttgccagcttcgccagcctgttgcccgccgccacc
ctggaaggcttgcgcagtgagccagcggcgaccttcctgcaactcgaccagcaggtcagc
cagcgtctcgaacaactgggccatcagcgcgatgagctggccgagcagcaagagcgccag
caggccatcgaaaaacaacagacccatcagcagcatcgccagcagcagtcagaagccctg
aatctgcaggtcgcgcagctctgctcccagcaacacgacgcccaggccaaactcagcgac
ttgctcggtgcgcacgagagcgccgaacagtggcaacagcagttggaccaggccgtcagc
caggcgcgccaaagcgaagccgacgccagccaggaactgcacgcggtgcacaccgcgctg
gtgcaactggtcgccgatctcaaggccctgctggaacgtcagcaagcgctcgagacggag
cgacaagccctggacacgcgcatcactgcgtggcgcgccgcgcatcccgagctggatgac
caaggcctgacccgcctgctggccttcgacgaggcccaggtcacggacctgcgccagcag
ttgcacacccgcgaaaaagccgtcgaacaagccggtgtattgctgcaggagcgcgaacag
cgcctggccgaacatcaggccttgcacaacggcaacctggacaccgagcagctggacaac
agccttgccgcgctcaaccagcaactggccgagggcgagaaacactgcgccgaactgcgc
gcccgtcaggccgaagaccagcggcgccaggacgccaaccacgccctggccgagcagatc
gccaaggcctatgaccaatggcagcgttgggcccgcctgaatgcgctgatcggttcggcc
accggcgacacgttccgcaaaatcgcccaggcctacaacctcgacctgctggtgcaccac
gccaacgtgcaattgcgccagctggtgcgccgctaccgccttaaacgcggcggcagcatg
cttggcctgctggtgatggacaccgagatgggcgacgaactgcgctcggtgcactcgctg
tcgggcggtgaaaccttcctcgtctccctggcgctcgccctgggtctggcgtcgatggcg
tccagtaccttgaagatcgagtcgctgtttatcgacgaaggtttcggcagcctcgacccc
gaatccctgcaactggcgatggacgccctggacggtttgcaggcccaggggcgcaaggtg
gcggtaatttcccacgtgcaggaaatgcacgaacgcatcccggtgcagatccaggtcaag
cgccagggcaatggcttgagcaccctggaggtcaagtga
DBGET
integrated database retrieval system
