Populus trichocarpa (black cottonwood): 18106590
Help
Entry
18106590 CDS
T01077
Name
(RefSeq) potassium channel SKOR isoform X1
KO
K21867
potassium channel
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18106590
Transporters [BR:
pop02000
]
Other transporters
Pores ion channels [TC:
1
]
18106590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ank_2
Ank
Ank_4
KHA
Ank_5
cNMP_binding
Ank_3
Ion_trans_2
Lig_chan
Motif
Other DBs
NCBI-GeneID:
18106590
NCBI-ProteinID:
XP_006372521
UniProt:
U5FGP6
LinkDB
All DBs
Position
17:complement(13700406..13708382)
Genome browser
AA seq
841 aa
AA seq
DB search
MDGHGNHRERNKKEDSDDDGEEEYEVEDLKDRIKSSRGSRFNLIEKEFGLVNNNGSSSMT
SWRRKLSRESVINGIRYVSSGFVIHPDNRWYRAWTKFILLWAVYSSFFTPMEFGFFRGLP
ENLFILDIVGQVAFLLDIILQFFIAYRDSQTYRTVYKRTPIALRYLKSHFIIDLLACLPW
DIIYKACGHREEVRYLLWIRLSRVRKVTDFFQKMEKDIRINYLFTRIVKLIVVELYCTHT
AACIFYHLATTLPSSQEGYTWIGSLKMGDYSYTSFREIDIWKRYTTSLYFAVITMATVGY
GDIHAVNLREMIFVMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLIKYMNRNR
LGKDIRNQIKGHVRLQYESSYTEASALQDLPISIRAKVSQTLYTEYIEKVPLLKGCSAEF
INQIVIRLHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIGQDGSEETVKLLPPNSSF
GEISILCNIPQPYTVRVCELCRLLRIDKQSFSNILEIYFYDGRKILDNLLEGKESNLRDK
QLESDITFHIGKQEAELALRVNSAAYHGDLYQLKGFIRAGADPNRTDYDGRSPLHLAASR
GYEDITLFLIQEGVDINIKDKFGNTPLLEAIKNGHDRVESLLFKQGAILNIDDAGSVLCR
AVARGDSDFLKRILSNGIDPNSKDYDHRTPLHVAASEGLYLMAKLLIEAGASVFSKDRWG
NTPLDEGRMCGSKKLIKLLEEAKSSQKLEFHYGTHETTEKVLPKKCTIFPFHPWAEEQRR
PGVVLWVPNTMEELVKAASEQLQFPDGSCILSEDAGKILDVNMIDGGQKLYLTSDQTHYL
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcatggcaatcacagagagagaaacaagaaagaggattcggacgatgatgga
gaagaggaatatgaagtggaagatttgaaagacaggataaaatcttcaagagggagtcga
tttaatttgatagagaaggagtttggactcgttaataataatgggtcgtcgtcgatgaca
agttggaggagaaaactgagtcgtgaatcggtcattaatggtattcgttatgtctcctca
ggtttcgttatccatcctgataataggtggtatcgagcatggacaaaattcattctatta
tgggcagtctactcttccttctttacaccaatggagtttggtttcttcagaggattacct
gagaacctcttcatattggacattgttggacaggttgctttccttcttgatatcatctta
caattcttcattgcctacagagatagtcagacttatcgtacggtctataagcgcactcct
attgctcttcggtatttgaaatctcattttatcattgatttgcttgcttgcttgccttgg
gacatcatctacaaggcttgtggacatagagaagaagtgaggtatctcttatggattagg
ctaagtagggtgcggaaagtaactgattttttccaaaagatggagaaggatatacgaata
aattacctttttacaaggattgtaaagcttatagtagtagaactctattgcacgcacacg
gcggcctgcattttttatcatttggctactactcttccatcttctcaagaagggtatact
tggattggaagtttgaaaatgggtgattatagctatacaagcttcagggagattgatatc
tggaagcggtacacaacatctctatattttgccgtcatcactatggcaactgttggttat
ggagatatacatgctgttaacttgagggaaatgatatttgtaatgatctatgtgtccttc
gacatgattctcggtgcttatttgatcggaaatatgacagcattaatagtaaaaggttcg
aagacagaaaagttcagggataaaatgacagatctcatcaaatatatgaatagaaataga
cttggaaaggacatccgaaatcagatcaaaggccatgttcgcttacagtatgagagtagc
tacactgaggcttctgctctgcaggatctccccatctctattcgtgcaaaggtttcccaa
actttgtacacagaatatatcgaaaaggttcccttacttaagggttgctctgcagaattt
attaatcaaattgtcatcaggcttcacgaggagttttttctccctggagaagtaattatg
gagcagggaaatgtggtagatcaactttactttgtctgtcatggtgtgctggaagaggtt
gggatagggcaggatggatcagaagaaactgtcaaactcttgccacctaacagctcattt
ggagaaatttctatcctttgcaacatcccccagccttatactgttagagtttgtgaatta
tgtcggcttctacggatcgataaacaatctttctcgaacatacttgaaatttacttttac
gatggacgcaaaattttggacaaccttttagaggggaaagaatctaatcttcgagataag
caattggaatcagatattacatttcatattggaaagcaagaagctgaacttgctttgagg
gttaatagtgcagcttatcatggagacctttatcagctgaagggcttcatccgagcagga
gctgatcccaatagaacagattatgatggaagatcacccttgcatcttgcagcatctaga
ggttatgaagatatcacacttttccttattcaagaaggagttgacattaacatcaaagat
aaatttggaaacacccccttgttggaagctataaagaatggacatgatcgagttgagtct
ttactttttaaacaaggggctatcttgaacatagatgatgctggtagtgttctgtgtaga
gctgttgcaagaggggattcagattttcttaaaagaattttgtccaatggaattgatcca
aactctaaagactacgatcatcgaactccacttcatgtagctgcttcagaaggattatat
ttgatggcaaagctgctgatagaagctggagctagtgttttctcaaaggacagatggggc
aacactccacttgacgagggccggatgtgtgggagcaagaaattgatcaagctgctagaa
gaagcaaaatcttctcagaaattggaattccattatggcacccatgagaccacagaaaaa
gtactcccaaagaaatgtacaattttccctttccatccatgggcagaagaacagagaaga
cctggagtggtgttatgggtcccaaacaccatggaagagcttgtaaaagcagcatcagag
cagctacagtttcctgatggttcttgtatattgtcagaagatgcaggtaaaattcttgat
gtaaacatgattgatggtggccagaagttgtatctaactagtgatcaaacacattactta
tcttga
DBGET
integrated database retrieval system
