Populus trichocarpa (black cottonwood): 7480039
Help
Entry
7480039 CDS
T01077
Name
(RefSeq) protein TIME FOR COFFEE
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon2
Motif
Other DBs
NCBI-GeneID:
7480039
NCBI-ProteinID:
XP_006386266
UniProt:
B9GSN1
LinkDB
All DBs
Position
2:complement(3523384..3529591)
Genome browser
AA seq
1274 aa
AA seq
DB search
MDRNREGRRPSNMAASNGLSRRRQQRATRDSPEEDGQIELQETARLRERGGSKRERDREL
SSRNKRSRRGGGDRLVQGSNKEEGEETTEESIGYEDEYEIEDGGVSRLRPPPRAVKQVAG
FRVPADEMIGVSVPRKARSASVKRSHESRVSGNGGFGSEDRRASTSPAASRSFEAASPSS
SNVSVRKKTKPNGPKTRPPKVSKCSSSSVQEDIEIEIAEVLYGLKKQSHGSKKEEKAEND
LQKLDSTDANDSKSSPNSNFAQTSILNQNNASASDSLLVLASKTQIMDADSVVVQNGLIA
PAVTDEREGDAKMEISATKSGKTSFYAESSEVSHDMGASKLATGLESQEEAIKQQDSKLA
IEESGVLTWENSVLPEEKSPVCNKVDVDFHDSLLEKSTSTVSKVENQREEKFKIDLMAPP
PMASSPEQDSFVDLSLDPKPAAQDVAMKMENVVKNEELADSLVKKEGVIVEEKIKTVGEK
RGLKLDFEKPHRNVQQKLLPRATISKVETTAQSGSVPSPIALPGWLSNLPSLGYMPSFQT
VVPMDGTAGSSKALQPPQFIPQPRPKRCATHHYIACNVRLHQQFIKMNHFWPATAGSAAL
CGAKPKDLNAMPSTENMIIGSTLQGSFPFVNLNPAQDKVQAVANIPVFTRKDRGSESTAL
IDAQKKQLVPPQPPQPAPAGNLMPGPAFIFSLNQHQASTATMTSQTGPSKSASSINNASF
PGNGIAGLTTNSSALPAMAAAVSFSYPNLAANETPYLTILPNNGYPFSISTPVGNQPTFR
GGTPSQALPFFNGSFYSSQMLHPSQLQQQQPQPVVQPGHQNASNSSGSSSSHKQPQSRQP
RGALVSTANFLTSTMMQSQQPPKQHVQSHHSRKLDTEMSGESTPIIADTRAGHSKKSVHG
PNFMVPVQPNFGLMASTTVGGSGNHGEKQQQQHQLSQEKNLKGGVELIPSQAFAMSFASF
NGSKTASNLNFSAMTQNPPILQSFPDMTRQGYQVITAAQATQKKNHQPSEGKSGGSSTNP
DDGKKAPSGKSTRGNGQTLVFDNSARTLNFVSSPSTGNWPSQSITATTSIPMAANSSSTS
QQQQLVQLQKQHILHQQLQQPIGAADSKASTSNSLPLPSIGAKFPNNASIFSQTQALGNS
SPQNPQWKNSSRIPSSQAPLTSLSASNTSVHKNASQQQGRVPQGHSQISFGSSSKSALPP
QGQQISSSCQSPSSGGNSRTTSMNAKANSSIPAIQSQQSDNSSSGNAQKSSPVCGRNVPS
ILSACPSHLSELKY
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaacagagaaggtagaagaccatccaacatggcagcctctaacggactatca
agacggcgacagcagagagctacaagagattctcctgaggaggatggacaaatagagtta
caagaaacggcgaggctgagagagagaggagggagtaaaagggaaagagatcgagaatta
tcgagtaggaataagcgtagtagaagaggaggaggagataggttagtacaaggaagtaat
aaagaagaaggagaagaaacaacagaagaaagcatcggttacgaagatgagtatgaaatt
gaagatggcggagtttctcggttgcggccgccgccaagagctgtaaaacaagttgctggt
tttagagtgcctgcagatgaaatgattggtgtctctgtaccgagaaaggctcggtcagct
tctgtgaagaggtcccatgagagtcgggtatcaggaaatggtggatttggtagtgaagat
aggcgagcttcgacttcaccggcggcgagtaggagttttgaggctgcatcgccttcttca
tcgaatgtttcagtcagaaaaaagacgaaaccaaatggacccaagactcgccctccaaaa
gtgtcgaaatgttcttctagttcagttcaggaagatattgagattgagattgcagaggtt
ttgtatggtttgaagaagcaatcacacgggtctaagaaggaggagaaggctgaaaatgat
ctgcagaagcttgattcaacggatgctaacgactccaagtcgtctccgaattcaaacttt
gctcagacatcgatattgaaccaaaataatgcctctgcttctgattctttacttgttttg
gcatcgaagacgcagataatggatgctgattcagtcgtggttcaaaatggtttaattgct
cctgcagttaccgatgaaagggaaggggatgcaaaaatggaaatttcagcgacgaaatcg
ggaaaaacatcgttttacgcagaatcgtctgaggtttcacatgacatgggtgcttccaaa
cttgcgactgggttagagtcacaggaggaagccattaaacaacaggattccaaactggca
attgaagaatctggggtcttaacttgggaaaattctgtattaccagaagagaagtcgcct
gtgtgcaataaagtggatgttgatttccatgattccttgttggaaaaatcgacttcaacc
gtgtcaaaggtagagaaccagagagaggagaagttcaagatcgatctgatggctcctcct
cccatggcgtcttctccagaacaggacagctttgtcgatttgtcattggatcctaagcct
gcagcccaagatgtggcaatgaaaatggaaaatgtggttaagaatgaagaattggcggac
agtctggtgaagaaggaaggagtgattgttgaagagaagataaagacagttggagaaaag
cgtggattaaaacttgattttgagaagccgcatcgcaatgtgcagcagaaactgctacct
agagctaccatttctaaagtggagactactgctcaatctggttcagtgccttcgccaatt
gctttacctgggtggctgagtaatcttccatctctgggatacatgccttcctttcagacg
gttgtgcccatggatggtactgccggatcatccaaggcattacagcctccacagtttatc
cctcaacctcggccaaagagatgcgcaacccaccattatattgcttgcaatgttcgctta
caccagcaatttattaagatgaaccatttctggccagcaacagctggctctgctgctcta
tgtggagccaagcccaaggatctcaatgcaatgccttccacggaaaacatgattattgga
agcactttgcaaggaagctttccatttgtgaatctaaatcctgcccaggacaaagtgcag
gctgtggcaaatattccagtttttactagaaaagatagaggctctgagagtactgccttg
atagatgcacagaagaagcagcttgtgcctcctcagcctccacagccagctccagctggt
aatctaatgcctggccctgctttcatcttctctctcaatcagcatcaagcgtccacagca
acaatgacaagtcaaacggggccttctaaatctgcttcctcaatcaacaatgcatcattt
cctggcaatgggatagctggactaacaacaaactcttcagcattgccagcaatggctgca
gctgtgagctttagttacccaaatttggcagccaacgaaactccttatttgacaattcta
ccaaacaatggctatccattctccatctccactcctgttggaaaccaaccaacatttaga
ggtggaaccccttctcaagcattgcctttctttaacgggtctttctactcatctcagatg
ctacatccatcccagcttcagcagcagcaacctcaacctgtagtccaaccaggacatcaa
aatgcaagtaattcaagtggctcatcatcatctcacaagcaaccccaaagtcggcaacca
cgaggggcacttgttagcactgctaattttttgacctcgacaatgatgcaatcacagcag
ccaccgaagcagcatgtgcaatcccatcactctaggaagcttgacactgagatgagtggg
gagagcaccccaataattgctgatacccgagccggtcactcaaaaaaaagtgttcatggc
cctaattttatggttcctgttcagccaaactttggtttaatggcatctaccactgttggt
ggcagtggaaatcatggtgagaagcagcaacagcaacatcaactgtcgcaggaaaagaat
ttaaagggtggagtagagcttatcccctctcaagcatttgcaatgtcatttgcctctttc
aatggaagcaagacagcatcaaaccttaatttctcagctatgacacaaaatcctcccatc
ttacaaagcttcccagacatgacacgtcagggataccaggttataacagcagctcaagcc
acacaaaagaagaatcaccagccatccgaagggaagtctggaggtagttcgaccaatcct
gatgatggaaaaaaagctccttcgggaaagtcaaccaggggtaatgggcagacacttgtt
tttgataattcagctcgaactctgaactttgtgtcatctccttccactggaaactggcct
tctcaatccatcactgcaaccacaagcattccaatggctgccaactcaagctcaacttct
cagcaacaacagttagttcagcttcagaaacaacatattttgcaccaacagctccagcag
cctattggtgcagcggacagtaaagcatcaacatctaacagcctgcctttgccttctatt
ggtgccaagtttccaaataatgcttccattttttctcaaactcaagctctgggcaatagt
tctccacaaaacccccagtggaagaactcatccagaatcccttcctcgcaagcacctctt
acatctctctctgcatccaacacctcagtccataagaatgcttcccagcaacaaggaaga
gtaccacaaggtcatagccaaatatcatttgggtcaagttccaagtctgctttgccacca
caagggcagcaaatatcctctagttgccagtctccatctagtggtggcaattcgagaaca
acttcaatgaatgccaaggctaattcatcaattcctgctatacaatcacagcagagtgac
aactcctcaagtgggaatgcccagaagtcctccccggtttgtggtaggaatgtgccttca
atcttaagcgcatgcccaagccacctttctgaactcaaatactag
DBGET
integrated database retrieval system